RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FBXO42Q6P3S6 717 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CEACAM20Q6UY09 585 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 PIWIL3Q7Z3Z3 882 aaKnown RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 C17orf82Q86X59 251 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CHERPQ8IWX8 916 aaKnown RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 MMP21Q8N119 569 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CARFQ8N187 725 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ARL14Q8N4G2 192 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CSNK1A1LQ8N752 337 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 NFKBIDQ8NI38 313 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 C1orf216Q8TAB5 229 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ADAMTS18Q8TE60 1221 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 RASSF5Q8WWW0 418 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 GATA6Q92908 595 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 AMDHD1Q96NU7 426 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CD180Q99467 661 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 SLC38A3Q99624 504 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 RBM4BQ9BQ04 359 aaKnown RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ADI1Q9BV57 179 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 RBM4Q9BWF3 364 aaKnown RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 NPLQ9BXD5 320 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ANKRD60Q9BZ19 345 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ERVMER34-1Q9H9K5 563 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 C3orf14Q9HBI5 128 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 SLAMF7Q9NQ25 335 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 C1GALT1Q9NS00 363 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 SIRT3Q9NTG7 399 aaPredicted RBP8.84□□□□□ -0.99
SMC1A-205ENST00000469129 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 USE1Q9NZ43 259 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 P2RX2Q9UBL9 471 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 EPHA6Q9UF33 1036 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 SUSD2Q9UGT4 822 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 PADI2Q9Y2J8 665 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 MAP4K5Q9Y4K4 846 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ATG4BQ9Y4P1 393 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 SLCO1B1Q9Y6L6 691 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 CSNK1G3Q9Y6M4 447 aa8.84□□□□□ -0.99
SMC1A-205ENST00000469129 TRIOO75962 3097 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 GOLGA4Q13439 2230 aaKnown RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 A0A1B0GTW7 788 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 A0A1W2PR48 441 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 BLACEA4D250 179 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TLCD2A6NGC4 264 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 G3V2T6 193 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 H0YGG7 62 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ACOX3O15254 700 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 PPM1DO15297 605 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 P2RX6O15547 441 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 EMC8O43402 210 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 PROM1O43490 865 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 DPM1O60762 260 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 PIAS2O75928 621 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 BMP10O95393 424 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ALBP02768 609 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 DCNP07585 359 aaKnown RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 FHP07954 510 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 IFI6P09912 130 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 NUDT7P0C024 238 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 UBTFL6P0CB48 400 aaPredicted RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 SMIM10L1P0DMW3 83 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 GNSP15586 552 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ITGA2P17301 1181 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 BCKDHBP21953 392 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 PPM1FP49593 454 aaPredicted RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 CDK9P50750 372 aaKnown RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 MAPK10P53779 464 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ARSFP54793 590 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ARF3P61204 181 aaPredicted RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 SELENOWP63302 87 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 NDUFA9Q16795 377 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 PRSS53Q2L4Q9 553 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 CRB2Q5IJ48 1285 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 COX20Q5RI15 118 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 C6orf52Q5T4I8 152 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 OR2T5Q6IEZ7 315 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TMEM214Q6NUQ4 689 aaKnown RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 TMEM154Q6P9G4 183 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 OGFOD3Q6PK18 319 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 SZRD1Q7Z422 152 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 C6orf120Q7Z4R8 191 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 WDR5BQ86VZ2 330 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TMEFF1Q8IYR6 380 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 CLEC4FQ8N1N0 589 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 LRRC25Q8N386 305 aaPredicted RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 DHRSXQ8N5I4 330 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 KCT2Q8NC54 265 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 OR2T29Q8NH02 315 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 GEMIN6Q8WXD5 167 aaKnown RBP8.83□□□□□ -1
SMC1A-205ENST00000469129 NRBF2Q96F24 287 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TCTN2Q96GX1 697 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 SMIM10Q96HG1 83 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TPD52L3Q96J77 140 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 CNBD2Q96M20 576 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 TRAPPC9Q96Q05 1148 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ZNF347Q96SE7 839 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 ZNF607Q96SK3 696 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 SLC29A1Q99808 456 aa8.83□□□□□ -1
SMC1A-205ENST00000469129 MAPKAP1Q9BPZ7 522 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms