RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRAMEF10O60809 474 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC43A1O75387 559 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ATP6AP2O75787 350 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 TUSC2O75896 110 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RASSF9O75901 435 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CCNDBP1O95273 360 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ESRRBO95718 433 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CHEK2O96017 543 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PDYNP01213 254 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KRT6AP02538 564 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KRT6BP04259 564 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EIF2S1P05198 315 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ADRB1P08588 477 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF806P0C7X5 589 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EBLN1P0CF75 366 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GIMD1P0DJR0 217 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 UROSP10746 265 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 UGT2B7P16662 529 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GNAZP19086 355 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EPORP19235 508 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 NCF2P19878 526 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CDH3P22223 829 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GCSHP23434 173 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PEBP1P30086 187 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 HOXD12P35452 270 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SERPINB5P36952 375 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 HNF4AP41235 474 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KRT6CP48668 564 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 HTR6P50406 440 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 DUSP3P51452 185 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CCR8P51685 355 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 AGFG1P52594 562 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PKNOX1P55347 436 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 NME5P56597 212 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 NAA20P61599 178 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PPP1CAP62136 330 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RAB1AP62820 205 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CYP4F2P78329 520 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CCL7P80098 99 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PRDX1Q06830 199 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 IFT88Q13099 833 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ARHGAP19Q14CB8 494 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ABRAXAS2Q15018 415 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZRSR2Q15696 482 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 IMPG1Q17R60 797 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GALNTL6Q49A17 601 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC9B1Q4ZJI4 515 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RABL3Q5HYI8 236 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GKAP1Q5VSY0 366 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 LIPJQ5W064 366 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ICE2Q659A1 982 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CGB2Q6NT52 195 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 MED27Q6P2C8 311 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GUSBP11Q6P575 273 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KLHL35Q6PF15 583 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 FIGLAQ6QHK4 219 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 DBX2Q6ZNG2 339 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RGS9BPQ6ZS82 235 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GDF7Q7Z4P5 450 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SPATA21Q7Z572 469 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OOSP2Q86WS3 158 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 KRT78Q8N1N4 520 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SDR16C5Q8N3Y7 309 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 FITM2Q8N6M3 262 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ARL10Q8N8L6 244 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SUMF1Q8NBK3 374 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF740Q8NDX6 193 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2A1Q8NGT9 310 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OR6Y1Q8NGX8 325 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4C6Q8NH72 309 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 BRIX1Q8TDN6 353 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 TWIST2Q8WVJ9 160 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZFPM2Q8WW38 1151 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SELENOMQ8WWX9 145 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RSC1A1Q92681 617 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EXTL1Q92935 676 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC22A18Q96BI1 424 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 GRAMD1AQ96CP6 724 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RNF31Q96EP0 1072 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CNDP2Q96KP4 475 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 C7orf26Q96N11 449 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 TGM7Q96PF1 710 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2A14Q96R47 310 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF382Q96SR6 550 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 HBEGFQ99075 208 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 NEU1Q99519 415 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 MACROD1Q9BQ69 325 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 AIF1LQ9BQI0 150 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EBF4Q9BQW3 602 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 HAUS8Q9BT25 410 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 DPH7Q9BTV6 452 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 TRMOQ9BU70 441 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 NTMT1Q9BV86 223 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 EDEM2Q9BV94 578 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 RAB11FIP5Q9BXF6 653 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM120AQ9BXJ8 343 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PCBD2Q9H0N5 130 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms