RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 IVDP26440 423 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 GGT5P36269 586 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 KCNC1P48547 511 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 ASCL1P50553 236 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 DGKQP52824 942 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 TGM3Q08188 693 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 TGFBIQ15582 683 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 FBXL19-AS1Q494R0 122 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 FBXO48Q5FWF7 155 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 PRAMEF20Q5VT98 475 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 POMZP3Q6PJE2 187 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 CAMKMTQ7Z624 323 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 LRRC25Q8N386 305 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-207ENST00000468385 FBXW8Q8N3Y1 598 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 TNIP2Q8NFZ5 429 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 NEIL3Q8TAT5 605 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 ACTRT1Q8TDG2 376 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 FAM222BQ8WU58 562 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
PTPN7-207ENST00000468385 SPACA9Q96E40 222 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-207ENST00000468385 WDR34Q96EX3 536 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 CAPZA3Q96KX2 299 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 RUNDC3BQ96NL0 473 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 KCNC2Q96PR1 638 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 ACKR4Q9NPB9 350 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 DNAJC11Q9NVH1 559 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-207ENST00000468385 EDARQ9UNE0 448 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 TEX264Q9Y6I9 313 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 ARHGAP21Q5T5U3 1957 aa12.04□□□□□ -0.48
PTPN7-207ENST00000468385 HRNRQ86YZ3 2850 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-207ENST00000468385 NCKAP5O14513 1909 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 HRKO00198 91 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 DVL2O14641 736 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 CLGNO14967 610 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 FGF17O60258 216 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 SCELO95171 688 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 ATP5A1P25705 553 aaKnown RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 STT3AP46977 705 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 WNT3P56703 355 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 KCNJ2P63252 427 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 IGLV3-21P80748 117 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 DOC2AQ14183 400 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 DAZAP2Q15038 168 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 DGAT2L6Q6ZPD8 337 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 ACOT4Q8N9L9 421 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 SLC22A8Q8TCC7 542 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 ESAMQ96AP7 390 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 TBCDQ9BTW9 1192 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 ROGDIQ9GZN7 287 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 QPCTLQ9NXS2 382 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 WWOXQ9NZC7 414 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 PPP2R2CQ9Y2T4 447 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 CHCHD2Q9Y6H1 151 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
PTPN7-207ENST00000468385 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-207ENST00000468385 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 ATE1O95260 518 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 EPPINO95925 133 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 RAF1P04049 648 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 COX7A2P14406 83 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 EPORP19235 508 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 HIST1H1TP22492 207 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 TACR1P25103 407 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 HSPA7P48741 367 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 TRPC1P48995 793 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 LRRC8AQ8IWT6 810 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 TCAIMQ8N3R3 496 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 LIX1Q8N485 282 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 SNX31Q8N9S9 440 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 SRFBP1Q8NEF9 429 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 WFDC11Q8NEX6 87 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 OR10G3Q8NGC4 313 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 DGAT2Q96PD7 388 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 MCMBPQ9BTE3 642 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 EFCAB11Q9BUY7 163 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 DERL2Q9GZP9 239 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 DDX47Q9H0S4 455 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 POPDC3Q9HBV1 291 aa12.02□□□□□ -0.49
PTPN7-207ENST00000468385 ZNF629Q9UEG4 869 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 CNOT11Q9UKZ1 510 aaKnown RBP12.02□□□□□ -0.49
PTPN7-207ENST00000468385 SPACA6W5XKT8 324 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms