RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLC2A12Q8TD20 617 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 DCAKDQ8WVC6 231 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 RBM18Q96H35 190 aaKnown RBP17.73■□□□□ 0.43
COL7A1-207ENST00000467985 CCDC120Q96HB5 630 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 DGAT2Q96PD7 388 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 MRPL57Q9BQC6 102 aaKnown RBP17.73■□□□□ 0.43
COL7A1-207ENST00000467985 PELOQ9BRX2 385 aaKnown RBP17.73■□□□□ 0.43
COL7A1-207ENST00000467985 SORBS1Q9BX66 1292 aaKnown RBP17.73■□□□□ 0.43
COL7A1-207ENST00000467985 DDX31Q9H8H2 851 aaKnown RBP17.73■□□□□ 0.43
COL7A1-207ENST00000467985 ZNF358Q9NW07 568 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 HPF1Q9NWY4 346 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 XPR1Q9UBH6 696 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 RNF11Q9Y3C5 154 aa17.73■□□□□ 0.43
COL7A1-207ENST00000467985 TACC2O95359 2948 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 MYOCOSA0A1B0GUC4 107 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 EXOC1LA0A1B0GW35 172 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 TRIM49D1C9J1S8 452 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 TFECO14948 347 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 PROM1O43490 865 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 FGF17O60258 216 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ERLIN1O75477 346 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 WISP2O76076 250 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ABHD2P08910 425 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 SNRPAP09012 282 aaKnown RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 FAM153BP0C7A2 387 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ESRRAP11474 423 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 RNF4P78317 190 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 PLIN5Q00G26 463 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ART3Q13508 389 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 FAM153CQ494X1 144 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 CYP20A1Q6UW02 462 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 MDGA2Q7Z553 956 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 CNPY4Q8N129 248 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ZNF808Q8N4W9 903 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ZFP62Q8NB50 900 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 WDR20Q8TBZ3 569 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ITLN2Q8WWU7 325 aaPredicted RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ART5Q96L15 291 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 RASL10BQ96S79 203 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 SERPINI1Q99574 410 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 NTMT1Q9BV86 223 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 MRPL46Q9H2W6 279 aaKnown RBP17.72■□□□□ 0.43
COL7A1-207ENST00000467985 WDR41Q9HAD4 459 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.72■□□□□ 0.432e-7■■■■□ 24.5
COL7A1-207ENST00000467985 SH3BGRL2Q9UJC5 107 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 PCTPQ9UKL6 214 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ENTPD4Q9Y227 616 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 ATG4BQ9Y4P1 393 aa17.72■□□□□ 0.43
COL7A1-207ENST00000467985 APCP25054 2843 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 WWP2O00308 870 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 OR7A17O14581 309 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 SEMA3DO95025 777 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 FAM58BPP0C7Q3 252 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 ABOP16442 354 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 BSGP35613 385 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 HK2P52789 917 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 ID2Q02363 134 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 C3AR1Q16581 482 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 RNFT1Q5M7Z0 435 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 FRG2Q64ET8 278 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 TRMT10CQ7L0Y3 403 aaKnown RBP17.71■□□□□ 0.43
COL7A1-207ENST00000467985 MRGPRGQ86SM5 289 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 NUDT13Q86X67 352 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 EID3Q8N140 333 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 PSD4Q8NDX1 1056 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 C16orf52Q8NHV5 167 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 MTBPQ96DY7 904 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 FRG2BQ96QU4 278 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 ZNF717Q9BY31 904 aaPredicted RBP17.71■□□□□ 0.43
COL7A1-207ENST00000467985 RYDENQ9NUL5 291 aaKnown RBP17.71■□□□□ 0.43
COL7A1-207ENST00000467985 RAB21Q9UL25 225 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 KLF2Q9Y5W3 355 aaPredicted RBP17.71■□□□□ 0.43
COL7A1-207ENST00000467985 ABCA12Q86UK0 2595 aa17.71■□□□□ 0.43
COL7A1-207ENST00000467985 A0A0A6YYD5 115 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 OR6B1O95007 311 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 ETHE1O95571 254 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 ALOX15P16050 662 aaPredicted RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 AGAP20933 346 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 SOX3P41225 446 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 NEK2P51955 445 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 SMSP52788 366 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 FOLH1Q04609 750 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 IFT88Q13099 833 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 MPEG1Q2M385 716 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 TTC19Q6DKK2 380 aaPredicted RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 MRM1Q6IN84 353 aaKnown RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 EMBQ6PCB8 327 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 XKRXQ6PP77 449 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 OPN5Q6U736 354 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 IL20RBQ6UXL0 311 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 LCA5Q86VQ0 697 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 OR4N5Q8IXE1 308 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 ST13P4Q8IZP2 240 aaPredicted RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 OR52B6Q8NGF0 335 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 ZNF721Q8TF20 911 aa17.7■□□□□ 0.42
COL7A1-207ENST00000467985 UBLCP1Q8WVY7 318 aaPredicted RBP17.7■□□□□ 0.42
COL7A1-207ENST00000467985 SENP5Q96HI0 755 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms