RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CLEC9AQ6UXN8 241 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 ZNF793Q6ZN11 406 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 DGAT2L6Q6ZPD8 337 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 LACC1Q8IV20 430 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 RHBDF1Q96CC6 855 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 SPACA9Q96E40 222 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 SENP5Q96HI0 755 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 TIMP4Q99727 224 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 MCMBPQ9BTE3 642 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 REXO4Q9GZR2 422 aaKnown RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 SLC6A15Q9H2J7 730 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 CORO1CQ9ULV4 474 aaPredicted RBP11.2□□□□□ -0.62
UBR4-211ENST00000467272 OARD1Q9Y530 152 aa11.2□□□□□ -0.62
UBR4-211ENST00000467272 CUBNO60494 3623 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MYOCOSA0A1B0GUC4 107 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 TUBAL3A6NHL2 446 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 CLCA1A8K7I4 914 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 HRKO00198 91 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 LY6G6DO95868 133 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 C1QAP02745 245 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 CLPSP04118 112 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 IFNA16P05015 189 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 HPNP05981 417 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 EPORP19235 508 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 CD22P20273 847 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 PLA2G16P53816 162 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 DCAF7P61962 342 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 ASPHQ12797 758 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 SERTAD2Q14140 314 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 KEAP1Q14145 624 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 SHEQ5VZ18 495 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 VASNQ6EMK4 673 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 DND1Q8IYX4 353 aaKnown RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 ZNF441Q8N8Z8 693 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MBD3L2Q8NHZ7 208 aaPredicted RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 LINC01560Q8TB33 94 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 CERS2Q96G23 380 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 CAPZA3Q96KX2 299 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MAPKAP1Q9BPZ7 522 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 LDAHQ9H6V9 325 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 GPRC5BQ9NZH0 403 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 MTRF1LQ9UGC7 380 aaKnown RBP11.19□□□□□ -0.62
UBR4-211ENST00000467272 EML6Q6ZMW3 1958 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 NCKAP5O14513 1909 aa11.19□□□□□ -0.62
UBR4-211ENST00000467272 ARHGAP21Q5T5U3 1957 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 A0A088AWK7 358 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 TAPBPO15533 448 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 FGF17O60258 216 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 LDB3O75112 727 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 BANF1O75531 89 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 IL18BPO95998 194 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 ZNF10P21506 573 aaPredicted RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 SAT1P21673 171 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 ATP5A1P25705 553 aaKnown RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 CXCR5P32302 372 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 STT3AP46977 705 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 NKX6-1P78426 367 aaPredicted RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 STX4Q12846 297 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 DUSP8Q13202 625 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 FRG1Q14331 258 aaKnown RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 SPANXN3Q5MJ09 141 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 FAM45BPQ6NSW5 357 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 TRIM40Q6P9F5 258 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 ADGRE4PQ86SQ3 457 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 PPIL6Q8IXY8 311 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 LRRC75A-AS1Q8N1F1 130 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 OR10G3Q8NGC4 313 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 SPATA3Q8NHX4 192 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 FAM45AQ8TCE6 357 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 F2RL3Q96RI0 385 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 TMEM79Q9BSE2 394 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 ALKBH4Q9NXW9 302 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 BOKQ9UMX3 212 aaPredicted RBP11.18□□□□□ -0.62
UBR4-211ENST00000467272 MPDZO75970 2070 aa11.18□□□□□ -0.62
UBR4-211ENST00000467272 NPEPPSL1A6NEC2 478 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 FAM171A2A8MVW0 826 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 IVDP26440 423 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 ADSLP30566 484 aaPredicted RBP11.17□□□□□ -0.62
UBR4-211ENST00000467272 CASP2P42575 452 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 KCNC1P48547 511 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 PCDH1Q08174 1060 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 RCN2Q14257 317 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 NTRK2Q16620 822 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 PRAMEF20Q5VT98 475 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 STEAP4Q687X5 459 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 TRMT10BQ6PF06 316 aaKnown RBP11.17□□□□□ -0.62
UBR4-211ENST00000467272 KIF18BQ86Y91 864 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 KRT78Q8N1N4 520 aa11.17□□□□□ -0.62
UBR4-211ENST00000467272 ACOT4Q8N9L9 421 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms