RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 PDXPQ96GD0 296 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 ELOVL6Q9H5J4 265 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 SNTG1Q9NSN8 517 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 MGAT4AQ9UM21 535 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 PRAMEF4O60810 478 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 HMGN1P05114 100 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 GGT2P36268 569 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 CDKN2CP42773 168 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 RUNDC3AQ59EK9 446 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 PRAMEF9Q5VWM5 478 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 SCRN2Q96FV2 425 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 SORCS2Q96PQ0 1159 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 MARVELD1Q9BSK0 173 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 GABARAPL3Q9BY60 117 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 OR51B5Q9H339 312 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 SUV39H2Q9H5I1 410 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 ABCB9Q9NP78 766 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 CUEDC1Q9NWM3 386 aaPredicted RBP17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 PTTG3PQ9NZH4 202 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 ACSL5Q9ULC5 683 aa17.24■□□□□ 0.35
SNAPC3-205ENST00000467062 LEFTY2O00292 366 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 CLDN9O95484 217 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 OLFM2O95897 454 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 ANXA5P08758 320 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 ACRP10323 421 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 RAB3AP20336 220 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 CCR2P41597 374 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 NSG1P42857 185 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 PCDH1Q08174 1060 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 TRIQKQ629K1 86 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 EBPLQ9BY08 206 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 RDH8Q9NYR8 311 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 KLF2Q9Y5W3 355 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 OR2AG2A6NM03 316 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 KHNYNO15037 678 aaKnown RBP17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 ZNF682O95780 498 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 METTL3Q86U44 580 aaKnown RBP17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 TIGD4Q8IY51 512 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 ZZZ3Q8IYH5 903 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 APIPQ96GX9 242 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 ZNF416Q9BWM5 594 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 REEP1Q9H902 201 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 PCDHB16Q9NRJ7 776 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 B4GALT6Q9UBX8 382 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 PRELID3BQ9Y3B1 194 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 CLCA3PQ9Y6N3 262 aa17.23■□□□□ 0.35
SNAPC3-205ENST00000467062 NEDD8-MDP1E9PL57 170 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CCL16O15467 120 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 PTP4A3O75365 173 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 EBLN1P0CF75 366 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 ITGB8P26012 769 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CLCNKAP51800 687 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 NUDT6P53370 316 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SLC14A1Q13336 389 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 NFE2L1Q14494 772 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 OR4F3Q6IEY1 312 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 GPR153Q6NV75 609 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TPRG1Q6ZUI0 275 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TRIM46Q7Z4K8 759 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TRIM69Q86WT6 500 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 FIBINQ8TAL6 211 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 GFM1Q96RP9 751 aaKnown RBP17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 NTMT1Q9BV86 223 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 LINC00597Q9H2U6 94 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 BRD9Q9H8M2 597 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 HEXA-AS1Q9H8Q6 139 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 POLMQ9NP87 494 aaPredicted RBP17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CPNE7Q9UBL6 633 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SZT2Q5T011 3432 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TRAV19A0A0A6YYK7 116 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TMEM202A6NGA9 273 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 FABP3P05413 133 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 EXOSC2Q13868 293 aaKnown RBP17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 TCEAL4Q96EI5 215 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 APOLD1Q96LR9 279 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 OR5M11Q96RB7 305 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SECISBP2Q96T21 854 aaKnown RBP17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 FAM129BQ96TA1 746 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CDCA4Q9BXL8 241 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SHARPINQ9H0F6 387 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 CLMPQ9H6B4 373 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 GALNT9Q9HCQ5 603 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SLC39A1Q9NY26 324 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 ZDHHC3Q9NYG2 299 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 GPRC5BQ9NZH0 403 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 NLKQ9UBE8 527 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 PHF11Q9UIL8 331 aa17.22■□□□□ 0.35
SNAPC3-205ENST00000467062 SLC28A1O00337 649 aa17.21■□□□□ 0.35
SNAPC3-205ENST00000467062 SOCS5O75159 536 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms