RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NDUFAF5Q5TEU4 345 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 GRHL2Q6ISB3 625 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 OPN5Q6U736 354 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 FAM47EQ6ZV65 393 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 RPRMLQ8N4K4 120 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 GOLM1Q8NBJ4 401 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 FBXO25Q8TCJ0 367 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 RND1Q92730 232 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 NXNL1Q96CM4 212 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 SGCZQ96LD1 299 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 DGAT2Q96PD7 388 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 RAB17Q9H0T7 212 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 SACM1LQ9NTJ5 587 aa17.73■□□□□ 0.43
COL9A3-206ENST00000466532 FAM90A27PA6NNH2 459 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 GLSO94925 669 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 CHRNB4P30926 498 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 IGLV3-21P80748 117 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 ASPHQ12797 758 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 NAB1Q13506 487 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 GXYLT1Q4G148 440 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 MYLK4Q86YV6 388 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 FAM109AQ8N4B1 249 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 TMEM251Q8N6I4 163 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 OR5M3Q8NGP4 307 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 HUS1BQ8NHY5 278 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 KCTD4Q8WVF5 259 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 RGMAQ96B86 450 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 SENP5Q96HI0 755 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 SMC6Q96SB8 1091 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 TREX2Q9BQ50 279 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 CENPKQ9BS16 269 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 RPF2Q9H7B2 306 aaKnown RBP17.72■□□□□ 0.43
COL9A3-206ENST00000466532 IL1RL2Q9HB29 575 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 PNPLA3Q9NST1 481 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 MS4A12Q9NXJ0 267 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 ADGRE2Q9UHX3 823 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 ACOT9Q9Y305 439 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 LIPGQ9Y5X9 500 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 CELSR1Q9NYQ6 3014 aa17.72■□□□□ 0.43
COL9A3-206ENST00000466532 NKX2-6A6NCS4 301 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 SYCE1LA8MT33 242 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 DYRK3O43781 588 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 P04436 131 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 CCL3P10147 92 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 MTHFD2P13995 350 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 CAPN3P20807 821 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 MAGEA5P43359 124 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 DNASE1L1P49184 302 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 NUP107P57740 925 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 IRF9Q00978 393 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 FOLH1Q04609 750 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 PMPCAQ10713 525 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 TRADDQ15628 312 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 MPEG1Q2M385 716 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 ZDHHC24Q6UX98 284 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 GPR180Q86V85 440 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 CCDC71Q8IV32 467 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-206ENST00000466532 CENPLQ8N0S6 344 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-206ENST00000466532 LILRB4Q8NHJ6 448 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.43
COL9A3-206ENST00000466532 MTERF1Q99551 399 aaKnown RBP17.71■□□□□ 0.43
COL9A3-206ENST00000466532 UCK2Q9BZX2 261 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 MCCC2Q9HCC0 563 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 DMRT3Q9NQL9 472 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 PHF11Q9UIL8 331 aa17.71■□□□□ 0.43
COL9A3-206ENST00000466532 OR14I1A6ND48 311 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 PLPP1O14494 284 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 IGHG3P01860 377 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 IGKV3-11P04433 115 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 GFAPP14136 432 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 CASQ1P31415 396 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 PIK3CBP42338 1070 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
COL9A3-206ENST00000466532 PLIN5Q00G26 463 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 TNFRSF17Q02223 184 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 BIKQ13323 160 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 SETDB1Q15047 1291 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 PIGGQ5H8A4 983 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 C18orf63Q68DL7 685 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 ZNF585AQ6P3V2 769 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 DGAT2L6Q6ZPD8 337 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 ACAD11Q709F0 780 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 C9orf40Q8IXQ3 194 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 OR5M9Q8NGP3 310 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 RHEBL1Q8TAI7 183 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 NUBPLQ8TB37 319 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 SLC22A8Q8TCC7 542 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 TANKQ92844 425 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 RBM18Q96H35 190 aaKnown RBP17.7■□□□□ 0.42
COL9A3-206ENST00000466532 ART5Q96L15 291 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 TUBA8Q9NY65 449 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-206ENST00000466532 ATG4BQ9Y4P1 393 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 PCDHGA11Q9Y5H2 935 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 F8P00451 2351 aa17.7■□□□□ 0.42
COL9A3-206ENST00000466532 CCDC168Q8NDH2 2452 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 A0A087X1B8 175 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 ATP6AP2A0A1C7CYW4 349 aa17.69■□□□□ 0.42
COL9A3-206ENST00000466532 HRKO00198 91 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms