RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FAM213AQ9BRX8 229 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 NTMT1Q9BV86 223 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 DNAJC11Q9NVH1 559 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 RARRES3Q9UL19 164 aa3.44□□□□□ -1.86
LRCH3-211ENST00000466054 TRBV5-4A0A0C4DH59 114 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 C5orf51A6NDU8 294 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 IGLON5A6NGN9 336 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 OGTO15294 1046 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 STBD1O95210 358 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 OR6A2O95222 327 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 PDGFBP01127 241 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 FHP07954 510 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 SERPINF2P08697 491 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 GATA1P15976 413 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 FERP16591 822 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 GPX3P22352 226 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 PTGER3P43115 390 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 ATP4BP51164 291 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 UCP2P55851 309 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 NPRL3Q12980 569 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 HEPACAMQ14CZ8 416 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 RAPH1Q70E73 1250 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 RPAINQ86UA6 219 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 LMNTD2Q8IXW0 634 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 FBXW8Q8N3Y1 598 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 C4orf32Q8N8J7 132 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 SPC24Q8NBT2 197 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 CABS1Q96KC9 395 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 RBM24Q9BX46 236 aaKnown RBP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 WWP1Q9H0M0 922 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 GANQ9H2C0 597 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 GNB4Q9HAV0 340 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 ACOXLQ9NUZ1 547 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 CWC25Q9NXE8 425 aaPredicted RBP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 NIP7Q9Y221 180 aaKnown RBP eCLIP3.43□□□□□ -1.86
LRCH3-211ENST00000466054 CSAG2Q9Y5P2 127 aa3.43□□□□□ -1.86
LRCH3-211ENST00000466054 ACOD1A6NK06 481 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SLC28A1O00337 649 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 TXNL1O43396 289 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 OR6B1O95007 311 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 BAG2O95816 211 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 CHRNGP07510 517 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SFTPBP07988 381 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 HOXD4P09016 255 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 FCARP24071 287 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 OAS2P29728 719 aaKnown RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SMSP52788 366 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SLC12A3P55017 1021 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 PEX3P56589 373 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 CDKL1Q00532 357 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 ACY1Q03154 408 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 CD300CQ08708 224 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 RPA4Q13156 261 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 TSTA3Q13630 321 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 PDE7AQ13946 482 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 GK2Q14410 553 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SIX1Q15475 284 aaPredicted RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SLC10A5Q5PT55 438 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 NUFIP2Q7Z417 695 aaKnown RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 STHQ8IWL8 128 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 BEST4Q8NFU0 473 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 OR6M1Q8NGM8 313 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 OR2L2Q8NH16 312 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 RNASE8Q8TDE3 154 aaKnown RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 ST7LQ8TDW4 575 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 KRT35Q92764 455 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 GLYATL1Q969I3 302 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 PCED1BQ96HM7 432 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 CDHR1Q96JP9 859 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 RCHY1Q96PM5 261 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 RAB11FIP5Q9BXF6 653 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 TMEM245Q9H330 911 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 ZCCHC3Q9NUD5 404 aaKnown RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 HMG20BQ9P0W2 317 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 TSPAN16Q9UKR8 245 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 MRPS2Q9Y399 296 aaKnown RBP3.42□□□□□ -1.86
LRCH3-211ENST00000466054 SNX5Q9Y5X3 404 aa3.42□□□□□ -1.86
LRCH3-211ENST00000466054 LOC390937A0A1W2PQ73 354 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 ZNF724A8MTY0 619 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 NEDD8-MDP1E9PL57 170 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 CSO75390 466 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 FRAT2O75474 233 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 PRG2P13727 222 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 EZRP15311 586 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 ACADSP16219 412 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 IL4RP24394 825 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 SLC1A4P43007 532 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 RPS27AP62979 156 aaKnown RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 ACTN3Q08043 901 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 MSLNQ13421 630 aaPredicted RBP3.41□□□□□ -1.86
LRCH3-211ENST00000466054 SLC17A1Q14916 467 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 MPPE1Q53F39 396 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 C9orf66Q5T8R8 295 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 DDI2Q5TDH0 399 aa3.41□□□□□ -1.86
LRCH3-211ENST00000466054 Q6ZRG5 221 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms