RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 CNIH2Q6PI25 160 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ZNF600Q6ZNG1 722 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PDZD3Q86UT5 571 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TRIM69Q86WT6 500 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 RASGRP3Q8IV61 690 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 BBS7Q8IWZ6 715 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 LGI4Q8N135 537 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 C19orf18Q8NEA5 215 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PCNPQ8WW12 178 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 ST8SIA4Q92187 359 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 UFD1Q92890 307 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PTP4A1Q93096 173 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 HGDQ93099 445 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PDXPQ96GD0 296 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 P2RY12Q9H244 342 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SYNDIG1Q9H7V2 258 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 NT5DC2Q9H857 520 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ANKRA2Q9H9E1 313 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 UCK1Q9HA47 277 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 FOLH1BQ9HBA9 442 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TMEM248Q9NWD8 314 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CLN6Q9NWW5 311 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ING4Q9UNL4 249 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SF3B6Q9Y3B4 125 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 IGLV3-10A0A075B6K4 115 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SUV39H1O43463 412 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 AP2A2O94973 939 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CPSF4O95639 269 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 POMCP01189 267 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 NUDT7P0C024 238 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 EBLN1P0CF75 366 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 HLA-EP13747 358 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SDC2P34741 201 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 HAAOP46952 286 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 EVX1P49640 407 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 HMGA2P52926 109 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SELENOWP63302 87 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ZNF33BQ06732 778 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 BTN1A1Q13410 526 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TEAD4Q15561 434 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CPSF6Q16630 551 aaKnown RBP eCLIP6.18□□□□□ -1.42
SIK3-207ENST00000465421 MPPE1Q53F39 396 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 LIPKQ5VXJ0 399 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TRIQKQ629K1 86 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 FRMPD2BQ6IN97 320 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 RBFAQ8N0V3 343 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ZNF655Q8N720 491 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 IL17RCQ8NAC3 791 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PROKR2Q8NFJ6 384 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 OR7G3Q8NG95 312 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 OR4K2Q8NGD2 314 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 UBTD2Q8WUN7 234 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SCMH1Q96GD3 660 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 FAM129BQ96TA1 746 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SMAD5Q99717 465 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 P2RY13Q9BPV8 354 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 MAPKAP1Q9BPZ7 522 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CRISPLD1Q9H336 500 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 LYARQ9NX58 379 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 MALT1Q9UDY8 824 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SNX11Q9Y5W9 270 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 MFSD2BA6NFX1 497 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 NPIPB8E9PQR5 432 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 FPGTO14772 594 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 YY2O15391 372 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 B3GAT3O94766 335 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CFDP00746 253 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 PDYNP01213 254 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 IFNA7P01567 189 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 IGLV3-27P01718 113 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PRPS2P11908 318 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CNR2P34972 360 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 BTCP35070 178 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PBX3P40426 434 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 CENPAP49450 140 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PUDPQ08623 228 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 TUSC3Q13454 348 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 DDX39BQ13838 428 aaKnown RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 ZMYND11Q15326 602 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 C22orf42Q6IC83 251 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 OR7E24Q6IFN5 339 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 ZNF770Q6IQ21 691 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 PAQR6Q6TCH4 344 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PTCHD4Q6ZW05 846 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 WDR53Q7Z5U6 358 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 TAGAPQ8N103 731 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 SENP5Q96HI0 755 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 DPCDQ9BVM2 203 aaPredicted RBP6.18□□□□□ -1.42
SIK3-207ENST00000465421 THSD1Q9NS62 852 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 UBQLN2Q9UHD9 624 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 PHF11Q9UIL8 331 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 OARD1Q9Y530 152 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 RAI2Q9Y5P3 530 aa6.18□□□□□ -1.42
SIK3-207ENST00000465421 LAMA2P24043 3122 aaKnown RBP6.17□□□□□ -1.42
SIK3-207ENST00000465421 TUBAL3A6NHL2 446 aa6.17□□□□□ -1.42
SIK3-207ENST00000465421 FAM170BA6NMN3 283 aa6.17□□□□□ -1.42
SIK3-207ENST00000465421 MAGEB17A8MXT2 336 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms