RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ACPTQ9BZG2 426 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 CWC25Q9NXE8 425 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-205ENST00000464541 KCNK6Q9Y257 313 aa4.59□□□□□ -1.67
PTCD3-205ENST00000464541 FER1L5A0AVI2 2057 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 TMEM129A0AVI4 362 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 PHF1O43189 567 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-205ENST00000464541 KRT83P78385 493 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 CCL14Q16627 93 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 TMEM44Q2T9K0 475 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 REP15Q6BDI9 236 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 ARMCX5Q6P1M9 558 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 PIWIL3Q7Z3Z3 882 aaKnown RBP4.58□□□□□ -1.68
PTCD3-205ENST00000464541 AGAP11Q8TF27 550 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 FUT8Q9BYC5 575 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 IL1RAPL2Q9NP60 686 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 CNIH4Q9P003 139 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 OR1A2Q9Y585 309 aa4.58□□□□□ -1.68
PTCD3-205ENST00000464541 FOXI3A8MTJ6 420 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 E9PAM4 449 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 NEDD8-MDP1E9PL57 170 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 ZNF354AO60765 605 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 GAS8O95995 478 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 EPOP01588 193 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 MELTFP08582 738 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 FAM200BP0CF97 657 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 CT45A8P0DMV1 189 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 CT45A9P0DMV2 189 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 VCLP18206 1134 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 TNNT3P45378 269 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 HSPA14Q0VDF9 509 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 RPS6KA1Q15418 735 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 OR1C1Q15619 314 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 CT45A2Q5DJT8 189 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 GLRA4Q5JXX5 417 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 LEMD1Q68G75 181 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 KCTD11Q693B1 232 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 TMEM126BQ8IUX1 230 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 GPD1LQ8N335 351 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 SAMD12Q8N8I0 201 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 RTL3Q8N8U3 475 aaKnown RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 TRPV3Q8NET8 790 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 ITLN1Q8WWA0 313 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 ATP6V1E2Q96A05 226 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 PNNQ9H307 717 aaKnown RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 NT5DC2Q9H857 520 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 MAGEF1Q9HAY2 307 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 PNPLA3Q9NST1 481 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 SPG21Q9NZD8 308 aa4.57□□□□□ -1.68
PTCD3-205ENST00000464541 ISY1Q9ULR0 285 aaKnown RBP4.57□□□□□ -1.68
PTCD3-205ENST00000464541 IGLV3-10A0A075B6K4 115 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 ZNF263O14978 683 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 CPA3P15088 417 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 CYP3A5P20815 502 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 SLC17A1Q14916 467 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 SLMAPQ14BN4 828 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 PCK2Q16822 640 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 ZNRF1Q8ND25 227 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 FLVCR1-AS1Q8TAF5 88 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 ZPLD1Q8TCW7 415 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 CFAP36Q96G28 342 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 WWP1Q9H0M0 922 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 LIME1Q9H400 295 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 DPEP3Q9H4B8 488 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 ARGLU1Q9NWB6 273 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-205ENST00000464541 PSORS1C1Q9UIG5 152 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 ZNF107Q9UII5 783 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-205ENST00000464541 EXOC6BQ9Y2D4 811 aa4.56□□□□□ -1.68
PTCD3-205ENST00000464541 TEX48A0A1B0GUV7 120 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 CSO75390 466 aaKnown RBP4.55□□□□□ -1.68
PTCD3-205ENST00000464541 CPNE6O95741 557 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 FOSL2P15408 326 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 GPX3P22352 226 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 CTNNA1P35221 906 aaKnown RBP4.55□□□□□ -1.68
PTCD3-205ENST00000464541 SERPINB6P35237 376 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 TNFSF10P50591 281 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 RPL27P61353 136 aaKnown RBP4.55□□□□□ -1.68
PTCD3-205ENST00000464541 LCP2Q13094 533 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 NHLRC3Q5JS37 347 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 OLFML2AQ68BL7 652 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 SERINC5Q86VE9 423 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 HIPK1Q86Z02 1210 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 TMCO5AQ8N6Q1 288 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 ICA1LQ8NDH6 482 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 TYMSOSQ8TAI1 123 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 ESAMQ96AP7 390 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 PCED1BQ96HM7 432 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 AGPAT1Q99943 283 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 TSPYL1Q9H0U9 437 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 C2orf40Q9H1Z8 148 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 FBXO7Q9Y3I1 522 aa4.55□□□□□ -1.68
PTCD3-205ENST00000464541 RNF212BA8MTL3 300 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 E2F3O00716 465 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 PHOX2AO14813 284 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 TGDSO95455 350 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 OR9G9P0C7N8 305 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 UROSP10746 265 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 MUTP22033 750 aa4.54□□□□□ -1.68
PTCD3-205ENST00000464541 MATKP42679 507 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms