RNA–Protein interactions for RNA: ENST00000464274.5

HCLS1-203, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-203ENST00000464274 LRIT2A6NDA9 550 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 SDR42E2A6NKP2 422 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 EEF1E1-BLOC1S5C9J1V9 151 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 EEF1E1O43324 174 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 B3GALT2O43825 422 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 TBX6O95947 436 aaPredicted RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 CTSSP25774 331 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 LIM2P55344 173 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 MPEG1Q2M385 716 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 HSP90AA5PQ58FG0 334 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 RBM20Q5T481 1227 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 NSUN5P2Q63ZY6 315 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 YTHDF3Q7Z739 585 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 MNS1Q8NEH6 495 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 OR14A16Q8NHC5 309 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 ZNF446Q9NWS9 450 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 QPCTLQ9NXS2 382 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 DAPP1Q9UN19 280 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 DYRK1BQ9Y463 629 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 NBEAL1Q6ZS30 2694 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 SONP18583 2426 aaKnown RBP13.72□□□□□ -0.21
HCLS1-203ENST00000464274 MED12Q93074 2177 aa13.72□□□□□ -0.21
HCLS1-203ENST00000464274 LDB3O75112 727 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 LRATO95237 230 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 ACSL3O95573 720 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 C1QAP02745 245 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 MAGEA6P43360 314 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 PLA2G16P53816 162 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 AP1S2P56377 157 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
HCLS1-203ENST00000464274 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.21
HCLS1-203ENST00000464274 ID2Q02363 134 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 STX4Q12846 297 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 ARMC3Q5W041 872 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 LMNTD2Q8IXW0 634 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.71□□□□□ -0.21
HCLS1-203ENST00000464274 DOCK7Q96N67 2140 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 RUNDC3BQ96NL0 473 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 TRIB1Q96RU8 372 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 TRIM54Q9BYV2 358 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 HOMER3Q9NSC5 361 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 TAS2R13Q9NYV9 303 aa13.71□□□□□ -0.21
HCLS1-203ENST00000464274 MRPS33Q9Y291 106 aaKnown RBP13.71□□□□□ -0.21
HCLS1-203ENST00000464274 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 MBD3L4A6NDZ8 208 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 MBD3L5A6NJ08 208 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 GOLGA8MH3BSY2 632 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 ZSCAN12O43309 604 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CRLF1O75462 422 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CERS1P27544 350 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 OPRM1P35372 400 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 VPS41P49754 854 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SARNPP82979 210 aaKnown RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 FOXF2Q12947 444 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CBLBQ13191 982 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SWT1Q5T5J6 900 aaKnown RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 VASNQ6EMK4 673 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 C9orf40Q8IXQ3 194 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 OR10G3Q8NGC4 313 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CALML6Q8TD86 181 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 DOK4Q8TEW6 326 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 ATL1Q8WXF7 558 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CCT6BQ92526 530 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 PIGTQ969N2 578 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SPACA9Q96E40 222 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 HSPBAP1Q96EW2 488 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SENP5Q96HI0 755 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 RBM24Q9BX46 236 aaKnown RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 PRDM14Q9GZV8 571 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 ACBD3Q9H3P7 528 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CNOT11Q9UKZ1 510 aaKnown RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 CHCHD2Q9Y6H1 151 aaPredicted RBP13.7□□□□□ -0.22
HCLS1-203ENST00000464274 KCNE2Q9Y6J6 123 aa13.7□□□□□ -0.22
HCLS1-203ENST00000464274 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
HCLS1-203ENST00000464274 HRKO00198 91 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 SIAH2O43255 324 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 TRAPPC6AO75865 159 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 IL18BPO95998 194 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 C1GALT1C1LP0DN25 315 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 GDF1P27539 372 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 IL2P60568 153 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 DGAT2L6Q6ZPD8 337 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 CCDC91Q7Z6B0 441 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
HCLS1-203ENST00000464274 C2CD4AQ8NCU7 369 aaPredicted RBP13.69□□□□□ -0.22
HCLS1-203ENST00000464274 FAM13CQ8NE31 585 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms