RNA–Protein interactions for RNA: ENST00000464048.1

DENND4B-204, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-204ENST00000464048 VAPAQ9P0L0 249 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 ZNF282Q9UDV7 671 aaPredicted RBP12.52□□□□□ -0.41
DENND4B-204ENST00000464048 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 PRDM4Q9UKN5 801 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 PACSIN3Q9UKS6 424 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 CORO2BQ9UQ03 480 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
DENND4B-204ENST00000464048 RTCAO00442 366 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 ACOT8O14734 319 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 CTSVO60911 334 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 GBAP04062 536 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 HOXB9P17482 250 aaPredicted RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 ATP5A1P25705 553 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 HTR1EP28566 365 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 GSK3BP49841 420 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 TLE3Q04726 772 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 CCNIQ14094 377 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 SNAP47Q5SQN1 464 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 MRM1Q6IN84 353 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 DNAJC14Q6Y2X3 702 aaPredicted RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 ANKRD46Q86W74 232 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 PTRH1Q86Y79 214 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 TRIML2Q8N7C3 387 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 FAM47BQ8NA70 645 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 GOLM1Q8NBJ4 401 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 GOT1L1Q8NHS2 421 aaPredicted RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 LRGUKQ96M69 825 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 LRFN5Q96NI6 719 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 TRAPPC9Q96Q05 1148 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 AICDAQ9GZX7 198 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 PRDM9Q9NQV7 894 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 RARRES3Q9UL19 164 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 VPS4AQ9UN37 437 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 PCDHGB4Q9UN71 923 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 EXO1Q9UQ84 846 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 SNX13Q9Y5W8 968 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 B3GALT1Q9Y5Z6 326 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 APC2O95996 2303 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 MAP1BP46821 2468 aaKnown RBP12.51□□□□□ -0.41
DENND4B-204ENST00000464048 ZZEF1O43149 2961 aa12.51□□□□□ -0.41
DENND4B-204ENST00000464048 MDC1Q14676 2089 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 AQP12BA6NM10 295 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 A8MU76 341 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 H0YGG7 62 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 DLGAP3O95886 979 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 PVRP15151 417 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 TCN1P20061 433 aaPredicted RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 PTPN6P29350 595 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ARF3P61204 181 aaPredicted RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 CLN3Q13286 438 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 RCN1Q15293 331 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 RABL3Q5HYI8 236 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 LCN8Q6JVE9 175 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 NIPAL1Q6NVV3 410 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ZNF793Q6ZN11 406 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 DHFR2Q86XF0 187 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 TICAM1Q8IUC6 712 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 AQP12AQ8IXF9 295 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 MSRB3Q8IXL7 192 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ESX1Q8N693 406 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SLC26A7Q8TE54 656 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 UTP15Q8TED0 518 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 POP5Q969H6 163 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 OR6C1Q96RD1 312 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SERINC2Q96SA4 455 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ECSITQ9BQ95 431 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 INPP5KQ9BT40 448 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SPATA9Q9BWV2 254 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 KLHL31Q9H511 634 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 S100A14Q9HCY8 104 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 NEUROD4Q9HD90 331 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 TAS2R7Q9NYW3 318 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 SLC25A37Q9NYZ2 338 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 FOXJ2Q9P0K8 574 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 ACTR3BQ9P1U1 418 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 STX18Q9P2W9 335 aaKnown RBP12.5□□□□□ -0.41
DENND4B-204ENST00000464048 PHF11Q9UIL8 331 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 MAGEL2Q9UJ55 1249 aa12.5□□□□□ -0.41
DENND4B-204ENST00000464048 PCDHB3Q9Y5E6 796 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms