RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TRAFD1O14545 582 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 LDB2O43679 373 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 KRT86O43790 486 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 KLK8O60259 260 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 LRCH4O75427 683 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 KIAA0754O94854 1291 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 EML2O95834 649 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 SOD1P00441 154 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 LCATP04180 440 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ETFAP13804 333 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 DDX5P17844 614 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 ITGAXP20702 1163 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 HOXD3P31249 432 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 CDH5P33151 784 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 PTGER4P35408 488 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 GARSP41250 739 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 CSNK1DP48730 415 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 P2RX3P56373 397 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 CDK3Q00526 305 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 RAD51Q06609 339 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 FOXM1Q08050 763 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 TMEM115Q12893 351 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 ILF3Q12906 894 aaKnown RBP eCLIP4.58□□□□□ -1.68
COPS3-204ENST00000462236 CHAF1BQ13112 559 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ITGADQ13349 1161 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 IL11RAQ14626 422 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 CYTH1Q15438 398 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 SLC25A52Q3SY17 297 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 C6orf141Q5SZD1 244 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 BRAT1Q6PJG6 821 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 SARM1Q6SZW1 724 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 KLHL24Q6TFL4 600 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 IGFL3Q6UXB1 125 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 LRRC31Q6UY01 552 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 DPPA4Q7L190 304 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ARCQ7LC44 396 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 IRF2BP2Q7Z5L9 587 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 CEP57L1Q8IYX8 460 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 C1orf131Q8NDD1 294 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 ST6GALNAC3Q8NDV1 305 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 FDCSPQ8NFU4 85 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 CT55Q8WUE5 264 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 SGCDQ92629 289 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 TIGD1Q96MW7 591 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ZNF641Q96N77 438 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 RUFY1Q96T51 708 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 POLDIP3Q9BY77 421 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 ULBP3Q9BZM4 244 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 FAM234AQ9H0X4 552 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ING2Q9H160 280 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ACTL8Q9H568 366 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 WDR26Q9H7D7 661 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 UPF2Q9HAU5 1272 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 PDFQ9HBH1 243 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 MAGEE1Q9HCI5 957 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 BPIFA1Q9NP55 256 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 PCDHB16Q9NRJ7 776 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 KRT84Q9NSB2 600 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 OGFRQ9NZT2 677 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 C5AR2Q9P296 337 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 AAR2Q9Y312 384 aaKnown RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 KLF2Q9Y5W3 355 aaPredicted RBP4.58□□□□□ -1.68
COPS3-204ENST00000462236 KCNE2Q9Y6J6 123 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 ARHGAP21Q5T5U3 1957 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
COPS3-204ENST00000462236 HIVEP2P31629 2446 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.57□□□□□ -1.683e-6■■■■■ 46.6
COPS3-204ENST00000462236 HEATR5AQ86XA9 2040 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FAM90A10PA6NDY2 464 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 A8MU76 341 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FAM72CH0Y354 149 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 INPP4BO15327 924 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 TOX3O15405 576 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 MED7O43513 233 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 ZG16O60844 167 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 SPAG6O75602 509 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 LETM1O95202 739 aaPredicted RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 IGSF6O95976 241 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 STSP08842 583 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PFKFB1P16118 471 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 NAGAP17050 411 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 CMA1P23946 247 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PTPN4P29074 926 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PRCPP42785 496 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 RGRP47804 291 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 CCL11P51671 97 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 GFERP55789 205 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 RPS18P62269 152 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 UBE2IP63279 158 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 PRAMEP78395 509 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FKBP3Q00688 224 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 TRAF2Q12933 501 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 CSTF3Q12996 717 aaKnown RBP4.57□□□□□ -1.68
COPS3-204ENST00000462236 ART3Q13508 389 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PEX6Q13608 980 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 PYCR3Q53H96 274 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 RAB6CQ53S08 254 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FAM72AQ5TYM5 149 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 FAM72DQ6L9T8 149 aa4.57□□□□□ -1.68
COPS3-204ENST00000462236 IYDQ6PHW0 289 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms