RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 ANKDD1BA6NHY2 528 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 A6NNC1 897 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 FGF17O60258 216 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 CLPSP04118 112 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 P04436 131 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 ATP5A1P25705 553 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 KCNC1P48547 511 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 PCDH1Q08174 1060 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 STX4Q12846 297 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 FBXO48Q5FWF7 155 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 CDKL4Q5MAI5 379 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 KRTAP1-3Q8IUG1 177 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 NEIL3Q8TAT5 605 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 CCT6BQ92526 530 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 LRRC39Q96DD0 335 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 SPACA9Q96E40 222 aaPredicted RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 CAPS2Q9BXY5 557 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 MS4A8Q9BY19 250 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 DERL2Q9GZP9 239 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 DDX47Q9H0S4 455 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 PPANQ9NQ55 473 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
SRRT-206ENST00000460194 PTBP2Q9UKA9 531 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 CNOT11Q9UKZ1 510 aaKnown RBP12.15□□□□□ -0.46
SRRT-206ENST00000460194 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 NCF1BA6NI72 391 aaPredicted RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 NCF1CA8MVU1 366 aaPredicted RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 RTCAO00442 366 aaKnown RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 EPPINO95925 133 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FBXO45P0C2W1 286 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 NCF1P14598 390 aaPredicted RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 PEX19P40855 299 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 STT3AP46977 705 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 ID2Q02363 134 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 CRYZQ08257 329 aaKnown RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 MGAT5Q09328 741 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FASTKD3Q14CZ7 662 aaKnown RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 TBCCQ15814 346 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FLYWCH1Q4VC44 716 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FNDC7Q5VTL7 733 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 WDR53Q7Z5U6 358 aaPredicted RBP12.14□□□□□ -0.47
SRRT-206ENST00000460194 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 LAS2Q8IYD9 372 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FBXW8Q8N3Y1 598 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 SPATA6LQ8N4H0 392 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 SLC15A4Q8N697 577 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 BBOF1Q8ND07 529 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 TNIP2Q8NFZ5 429 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 SLC6A15Q9H2J7 730 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 PLEKHF2Q9H8W4 249 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 DMRT3Q9NQL9 472 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 DNAJC11Q9NVH1 559 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
SRRT-206ENST00000460194 HSPB2A8KAH6 182 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 FAM47E-STBD1D6RA91 191 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 E7ESA3 106 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 CES2O00748 559 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 ATE1O95260 518 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 C1QAP02745 245 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 HIST1H1TP22492 207 aaPredicted RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 HOXC12P31275 282 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 HPDP32754 393 aaPredicted RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 TIMP3P35625 211 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 HSPA7P48741 367 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 ZNF136P52737 540 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 WNT3P56703 355 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 PPP2R2AP63151 447 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 RCN2Q14257 317 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 OR4D1Q15615 310 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 HSPB2Q16082 182 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 SULT1C3Q6IMI6 304 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 PAMR1Q6UXH9 720 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 PDPRQ8NCN5 879 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 RNASE6Q93091 150 aaKnown RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 PPWD1Q96BP3 646 aaKnown RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 UBXN10Q96LJ8 280 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 EFCAB11Q9BUY7 163 aa12.13□□□□□ -0.47
SRRT-206ENST00000460194 ZNF717Q9BY31 904 aaPredicted RBP12.13□□□□□ -0.47
SRRT-206ENST00000460194 RHOJQ9H4E5 214 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms