RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KCNC2Q96PR1 638 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 ELAC2Q9BQ52 826 aaKnown RBP14.66□□□□□ -0.06
SDF4-204ENST00000459994 TBCDQ9BTW9 1192 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 YIPF2Q9BWQ6 316 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 ROGDIQ9GZN7 287 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 FAM107BQ9H098 131 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 WDR55Q9H6Y2 383 aaPredicted RBP14.66□□□□□ -0.06
SDF4-204ENST00000459994 AKTIPQ9H8T0 292 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 ADAM29Q9UKF5 820 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 NXT1Q9UKK6 140 aaKnown RBP14.66□□□□□ -0.06
SDF4-204ENST00000459994 B3GNT3Q9Y2A9 372 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 TMED5Q9Y3A6 229 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 ZGRF1Q86YA3 2104 aa14.66□□□□□ -0.06
SDF4-204ENST00000459994 A0A0G2JND7 137 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 IDSB3KWA1 339 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 PLPP1O14494 284 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ERI3O43414 337 aaKnown RBP14.65□□□□□ -0.06
SDF4-204ENST00000459994 SH3BGRLO75368 114 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 SEC22BO75396 215 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 SCELO95171 688 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 IGHEP01854 428 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ACPPP15309 386 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ALOX12P18054 663 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 LBPP18428 481 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 BSGP35613 385 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 RAP1GDS1P52306 607 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ARFIP2P53365 341 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ACSM2AQ08AH3 577 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 DSG2Q14126 1118 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 HERC3Q15034 1050 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 EIF2S3LQ2VIR3 472 aaKnown RBP14.65□□□□□ -0.06
SDF4-204ENST00000459994 SPDYAQ5MJ70 313 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ACSM2BQ68CK6 577 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 OR4C11Q6IEV9 310 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 IGFL2Q6UWQ7 119 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 Q6ZS92 163 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 HPS6Q86YV9 775 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 APIPQ96GX9 242 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 FCRL1Q96LA6 429 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 PPP1R36Q96LQ0 422 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 QRFPRQ96P65 431 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 OR52B2Q96RD2 323 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 EBF4Q9BQW3 602 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 TMEM120AQ9BXJ8 343 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 ZNF717Q9BY31 904 aaPredicted RBP14.65□□□□□ -0.06
SDF4-204ENST00000459994 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
SDF4-204ENST00000459994 DDX31Q9H8H2 851 aaKnown RBP14.65□□□□□ -0.06
SDF4-204ENST00000459994 TCF7L2Q9NQB0 619 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 PRDM7Q9NQW5 492 aa14.65□□□□□ -0.06
SDF4-204ENST00000459994 A0A088AWK7 358 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 GOLGA8QA0A0J9YX86 632 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 GOLGA8OA6NCC3 632 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 C4orf51C9J302 202 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 GOLGA8NF8WBI6 632 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 PEX11AO75192 247 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 B3GALT4O96024 378 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 HPP00738 406 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 ZNF888P0CJ79 500 aaPredicted RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 PCSK2P16519 638 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 IL1RNP18510 177 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 ZNF10P21506 573 aaPredicted RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 PLA2G16P53816 162 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 EMP2P54851 167 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 RAB8AP61006 207 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 ERVK-8P63133 956 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 EMX2Q04743 252 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 MAD2L1Q13257 205 aaPredicted RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 LSM12Q3MHD2 195 aaKnown RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 PAGE2Q7Z2X7 111 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 COMMD6Q7Z4G1 85 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 PDSS2Q86YH6 399 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 ZADH2Q8N4Q0 377 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 C1orf52Q8N6N3 182 aaKnown RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 CATSPER1Q8NEC5 780 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 ZCCHC10Q8TBK6 192 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 C10orf82Q8WW14 230 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 PSMF1Q92530 271 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 NACC2Q96BF6 587 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 MVB12AQ96EY5 273 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 PSMG3-AS1Q96PY0 264 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 LHPPQ9H008 270 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 CLK4Q9HAZ1 481 aaKnown RBP14.64□□□□□ -0.07
SDF4-204ENST00000459994 ASIC5Q9NY37 505 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 GIMAP2Q9UG22 337 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 PCDHGA10Q9Y5H3 936 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 LRRK2Q5S007 2527 aa14.64□□□□□ -0.07
SDF4-204ENST00000459994 CROCCQ5TZA2 2017 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 IGHV1-45A0A0A0MS14 117 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 SAP18O00422 153 aaKnown RBP14.63□□□□□ -0.07
SDF4-204ENST00000459994 GALR3O60755 368 aaPredicted RBP14.63□□□□□ -0.07
SDF4-204ENST00000459994 DNAJB6O75190 326 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 MYO1DO94832 1006 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 ALPPP05187 535 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 HIST1H1TP22492 207 aaPredicted RBP14.63□□□□□ -0.07
SDF4-204ENST00000459994 ATP5A1P25705 553 aaKnown RBP14.63□□□□□ -0.07
SDF4-204ENST00000459994 MAPK1P28482 360 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 MTTPP55157 894 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 SKP1P63208 163 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 PCOLCEQ15113 449 aa14.63□□□□□ -0.07
SDF4-204ENST00000459994 GALNTL6Q49A17 601 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms