RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 PRSS44E7EML9 344 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 AP1G1O43747 822 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 SNNO75324 88 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 ETFAP13804 333 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NUDT6P53370 316 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 RPS3AP61247 264 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 NPRL3Q12980 569 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 UAP1L1Q3KQV9 507 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TMEM205Q6UW68 189 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NUP54Q7Z3B4 507 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ANKRD46Q86W74 232 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ZNF584Q8IVC4 421 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 SLC22A17Q8WUG5 538 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 KIAA1191Q96A73 305 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TXNDC15Q96J42 360 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 FCRL3Q96P31 734 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MROQ9BYG7 248 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 CLDND1Q9NY35 253 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ZSWIM8A7E2V4 1837 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LRRC37A2A6NM11 1700 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 SPATA31D3P0C874 917 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 RAB3AP20336 220 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 TLE3Q04726 772 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NAE1Q13564 534 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NDUFAF5Q5TEU4 345 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NANOGP8Q6NSW7 305 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 C15orf39Q6ZRI6 1047 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 SPATA31D4Q6ZUB0 917 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 OR7G3Q8NG95 312 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 POC1BQ8TC44 478 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 AUTS2Q8WXX7 1259 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MALSU1Q96EH3 234 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 PCED1BQ96HM7 432 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NELL2Q99435 816 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 CD180Q99467 661 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 EPYCQ99645 322 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 NANOGQ9H9S0 305 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ITM2CQ9NQX7 267 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 CFAP97Q9P2B7 532 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 CD300AQ9UGN4 299 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 A0A075B6Q4 140 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LOC100509620A0A075B734 347 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TRAV19A0A0A6YYK7 116 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 GXYLT2A0PJZ3 443 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 EFCAB7A8K855 629 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 F5H5P2 479 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MITFO75030 526 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 ALX3O95076 343 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 DBIP07108 87 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 BCKDHAP12694 445 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ITGB8P26012 769 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 EVI2BP34910 448 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 ERVK-21P61565 698 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 VLDLRP98155 873 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 IRF9Q00978 393 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 ZNF155Q12901 538 aaPredicted RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 SP140Q13342 867 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LASP1Q14847 261 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 TPGS1Q6ZTW0 290 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 OR56A1Q8NGH5 318 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TESCQ96BS2 214 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 RHBGQ9H310 441 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 CMPK1P30085 196 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MPIP34949 423 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 OR12D2P58182 307 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MAXP61244 160 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 MADCAM1Q13477 382 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 CEACAM7Q14002 265 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 AAK1Q2M2I8 961 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 UBE2UQ5VVX9 321 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 RTL10Q7L3V2 364 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 C12orf29Q8N999 325 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 POGLUT1Q8NBL1 392 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 TFAP2CQ92754 450 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 EXOSC8Q96B26 276 aaKnown RBP9.37□□□□□ -0.91
UFD1-205ENST00000459854 PIP5K1AQ99755 562 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 SULT4A1Q9BR01 284 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 DOHHQ9BU89 302 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 OR51J1Q9H342 316 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 UFSP2Q9NUQ7 469 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 FBXW11Q9UKB1 542 aa9.37□□□□□ -0.91
UFD1-205ENST00000459854 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 AGRPO00253 132 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 INSIG1O15503 277 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 HNRNPA1P09651 372 aaKnown RBP eCLIP9.36□□□□□ -0.912e-8■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms