RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MC1RQ01726 317 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 EMX2Q04743 252 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ACSM2AQ08AH3 577 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CSTF3Q12996 717 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 AGKQ53H12 422 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 DEPDC1Q5TB30 811 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ACSM2BQ68CK6 577 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 SIGIRRQ6IA17 410 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF793Q6ZN11 406 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 RAB11FIP2Q7L804 512 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FUNDC1Q8IVP5 155 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 DNAJC22Q8N4W6 341 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 OR8K5Q8NH50 307 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 UBE2E3Q969T4 207 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 MS4A6EQ96DS6 147 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 CMTM7Q96FZ5 175 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 ZNF845Q96IR2 970 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 PPP3R2Q96LZ3 170 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 TSC22D3Q99576 134 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 SPRTNQ9H040 489 aaPredicted RBP9.79□□□□□ -0.84
USP39-210ENST00000459775 RAD21L1Q9H4I0 556 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 AIG1Q9NVV5 245 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 EXTL2Q9UBQ6 330 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 FTSJ1Q9UET6 329 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 EPHA6Q9UF33 1036 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 MSRB2Q9Y3D2 182 aa9.79□□□□□ -0.84
USP39-210ENST00000459775 IGHV5-10-1A0A0J9YXX1 117 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 FLRT2O43155 660 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 TMPRSS11DO60235 418 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 BRINP1O60477 761 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 DCTN3O75935 186 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 CPNE6O95741 557 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 PLGP00747 810 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 EFNA1P20827 205 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 PTX3P26022 381 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 PIK3R1P27986 724 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 ZFP36L2P47974 494 aaKnown RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 GABRA4P48169 554 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 DGKQP52824 942 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 RPS15AP62244 130 aaKnown RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 WASHC2DQ5SRD0 308 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 ZNF362Q5T0B9 420 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 OGFOD2Q6N063 350 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 BORAQ6PGQ7 559 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 CYP20A1Q6UW02 462 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 RNF44Q7L0R7 432 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 ASPGQ86U10 573 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 KIRREL3Q8IZU9 778 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 METTL27Q8N6F8 245 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 OR8K3Q8NH51 312 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 MAGEB10Q96LZ2 347 aaPredicted RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 NT5DC2Q9H857 520 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 BRF2Q9HAW0 419 aa9.78□□□□□ -0.84
USP39-210ENST00000459775 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP39-210ENST00000459775 RUVBL1Q9Y265 456 aaKnown RBP9.78□□□□□ -0.84
USP39-210ENST00000459775 MN1Q10571 1320 aaPredicted RBP9.77□□□□□ -0.84
USP39-210ENST00000459775 GNG14A0A1W2PPG7 69 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PSMD12O00232 456 aaPredicted RBP9.77□□□□□ -0.84
USP39-210ENST00000459775 ANKRD28O15084 1053 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PDPK1O15530 556 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PEX1O43933 1283 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 CCDC22O60826 627 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 VPS4BO75351 444 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 CLEC3AO75596 197 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 ABCB1P08183 1280 aaPredicted RBP9.77□□□□□ -0.84
USP39-210ENST00000459775 ANXA4P09525 319 aaPredicted RBP9.77□□□□□ -0.84
USP39-210ENST00000459775 BSGP35613 385 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 AHRP35869 848 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 RAP1GDS1P52306 607 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 BTN3A2P78410 334 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 RPS6KA2Q15349 733 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PRSS53Q2L4Q9 553 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 DEFB134Q4QY38 66 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PHF19Q5T6S3 580 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 METTL21CQ5VZV1 264 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 WDR73Q6P4I2 378 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 TMEM71Q6P5X7 295 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 WDR74Q6RFH5 385 aaPredicted RBP9.77□□□□□ -0.84
USP39-210ENST00000459775 RNF165Q6ZSG1 346 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 MARCH9Q86YJ5 346 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 METTL4Q8N3J2 472 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 CSNK1A1LQ8N752 337 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 SCAIQ8N9R8 606 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PROKR1Q8TCW9 393 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 NAT6Q93015 286 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 VPS33AQ96AX1 596 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 TM4SF19Q96DZ7 209 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 CCDC74BQ96LY2 380 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 SERPINI1Q99574 410 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 SCNM1Q9BWG6 230 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 SLC6A16Q9GZN6 736 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 RAB33BQ9H082 229 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 NTN4Q9HB63 628 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 C5AR2Q9P296 337 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 KIF17Q9P2E2 1029 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 PCDHGB2Q9Y5G2 931 aa9.77□□□□□ -0.84
USP39-210ENST00000459775 KLK4Q9Y5K2 254 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms