RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PRAMEF33A0A0G2JMD5 474 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 M0R082 166 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SYT5O00445 386 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PLPP1O14494 284 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ZW10O43264 779 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PRAMEF10O60809 474 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 MFN2O95140 757 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 AGR2O95994 175 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 VIPP01282 170 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 OPN1SWP03999 348 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SCG5P05408 212 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 BCHEP06276 602 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 STSP08842 583 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ACADMP11310 421 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 NR4A1P22736 598 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 CHMP24386 653 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 GADD45AP24522 165 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PSMA1P25786 263 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 EPHA2P29317 976 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 BSGP35613 385 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 LIPAP38571 399 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SLC15A1P46059 708 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 KCNJ5P48544 419 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PCBP4P57723 403 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 LSM3P62310 102 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 RUNX1T1Q06455 604 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 MPEG1Q2M385 716 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 METRNLQ641Q3 311 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 C12orf73Q69YU5 71 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 LAIR1Q6GTX8 287 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF770Q6IQ21 691 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 KLHL17Q6TDP4 642 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF852Q6ZMS4 543 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 CCDC103Q8IW40 242 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SAMD14Q8IZD0 417 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 LILRA3Q8N6C8 439 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 PROKR2Q8NFJ6 384 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 B3GNT7Q8NFL0 401 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 OR56A1Q8NGH5 318 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SUN3Q8TAQ9 357 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SLC38A5Q8WUX1 472 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 POF1BQ8WVV4 589 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SORCS1Q8WY21 1168 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ARRDC3Q96B67 414 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 OTUB1Q96FW1 271 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 TMEM80Q96HE8 168 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SLC35G5Q96KT7 338 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 MGLLQ99685 303 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 NIPSNAP1Q9BPW8 284 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 CXorf36Q9H7Y0 433 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 NMNAT1Q9HAN9 279 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 MOV10Q9HCE1 1003 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ISYNA1Q9NPH2 558 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 KRCC1Q9NPI7 259 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 GPR83Q9NYM4 423 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ANKMY1Q9P2S6 941 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 ITM2BQ9Y287 266 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 TRAPPC4Q9Y296 219 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 HEBP2Q9Y5Z4 205 aa8.41□□□□□ -1.06
HDAC3-202ENST00000459727 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
HDAC3-202ENST00000459727 A0A0G2JPF8 293 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 GSAPA4D1B5 854 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 KRT87PA6NCN2 255 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 HNRNPCL2B2RXH8 293 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 HNRNPCL3B7ZW38 293 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 C5orf67F2Z3F1 127 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 BOLA2-SMG1P6H3BVE0 249 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 TOR1BO14657 336 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 HAT1O14929 419 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MYL12BO14950 172 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SPINT1O43278 529 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ASNA1O43681 348 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 OR10H3O60404 316 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MAN1A2O60476 641 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ADH1BP00325 375 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 HNRNPCL4P0DMR1 293 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 CEBPBP17676 345 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ALDH4A1P30038 563 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 C21orf33P30042 268 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 AHRP35869 848 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SLC19A1P41440 591 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 OR1E2P47887 323 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 CCT3P49368 545 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 EIF2B2P49770 351 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 XKP51811 444 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SMSP52788 366 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 ERVFC1P60507 584 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 PRR5P85299 388 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MC1RQ01726 317 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MLLT11Q13015 90 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 NFE2L1Q14494 772 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SF1Q15637 639 aaKnown RBP8.4□□□□□ -1.06
HDAC3-202ENST00000459727 DUSP6Q16828 381 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 SYT16Q17RD7 645 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 KLHL22Q53GT1 634 aa8.4□□□□□ -1.06
HDAC3-202ENST00000459727 MFSD4BQ5TF39 518 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms