RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 OR5L2Q8NGL0 311 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 TMEM125Q96AQ2 219 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 ANKRD9Q96BM1 317 aaPredicted RBP21.62■■□□□ 1.05
CBX3-204ENST00000456948 C19orf60Q96EN9 201 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 SMC6Q96SB8 1091 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 ZNF717Q9BY31 904 aaPredicted RBP21.62■■□□□ 1.05
CBX3-204ENST00000456948 MID1IP1Q9NPA3 183 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.62■■□□□ 1.05
CBX3-204ENST00000456948 OXSMQ9NWU1 459 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 CLDN16Q9Y5I7 305 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 ESPL1Q14674 2120 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FOXO6A8MYZ6 492 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 GPR75O95800 540 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 CD96P40200 585 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 NAGLUP54802 743 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FOLH1Q04609 750 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 OR1C1Q15619 314 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 LIPMQ5VYY2 423 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 C18orf63Q68DL7 685 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 OR52E8Q6IFG1 317 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 TMEM156Q8N614 296 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FAM98AQ8NCA5 519 aaKnown RBP21.61■■□□□ 1.05
CBX3-204ENST00000456948 DNAJB8Q8NHS0 232 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 GRHL3Q8TE85 626 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FAR1Q8WVX9 515 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 APOPT1Q96IL0 206 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 MRPL1Q9BYD6 325 aaKnown RBP21.61■■□□□ 1.05
CBX3-204ENST00000456948 OR8D2Q9GZM6 311 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FARSBQ9NSD9 589 aaKnown RBP21.61■■□□□ 1.05
CBX3-204ENST00000456948 MKS1Q9NXB0 559 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 LRFN1Q9P244 771 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 PSME2Q9UL46 239 aa21.61■■□□□ 1.05
CBX3-204ENST00000456948 FLNBO75369 2602 aaKnown RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 ASH1LQ9NR48 2969 aaKnown RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 A0A1W2PR48 441 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 TCP11X1B4DZS4 312 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 TGFBR3LH3BV60 316 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 TMPRSS11DO60235 418 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 ALOX15P16050 662 aaPredicted RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 GNLYP22749 145 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 PIK3R1P27986 724 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 IGLV3-21P80748 117 aaPredicted RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 ID2Q02363 134 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 CROCCP2Q86T23 111 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 TRABD2AQ86V40 505 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 OR4N5Q8IXE1 308 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 SRRM1Q8IYB3 904 aaKnown RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 ST13P4Q8IZP2 240 aaPredicted RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 PTPMT1Q8WUK0 201 aaPredicted RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 BARD1Q99728 777 aaKnown RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 TMEM109Q9BVC6 243 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 FAIM2Q9BWQ8 316 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 GSTO2Q9H4Y5 243 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 OLAHQ9NV23 265 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 SENP1Q9P0U3 644 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 ZNF225Q9UK10 706 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 RAB21Q9UL25 225 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 YARS2Q9Y2Z4 477 aaKnown RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 PLLPQ9Y342 182 aa21.6■■□□□ 1.05
CBX3-204ENST00000456948 UBR5O95071 2799 aaPredicted RBP21.6■■□□□ 1.05
CBX3-204ENST00000456948 A0A1B0GTL3 188 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 FGF17O60258 216 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 GBAP04062 536 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 TPP2P29144 1249 aaPredicted RBP21.59■■□□□ 1.05
CBX3-204ENST00000456948 TRHRP34981 398 aaPredicted RBP21.59■■□□□ 1.05
CBX3-204ENST00000456948 DEKP35659 375 aaKnown RBP21.59■■□□□ 1.05
CBX3-204ENST00000456948 HLCSP50747 726 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 GPR143P51810 404 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 TRA2BP62995 288 aaKnown RBP21.59■■□□□ 1.05
CBX3-204ENST00000456948 FHL5Q5TD97 284 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 C6orf163Q5TEZ5 329 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 COMMD6Q7Z4G1 85 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 ARMC10Q8N2F6 343 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 AMER2Q8N7J2 671 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 OR8K3Q8NH51 312 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 THAP3Q8WTV1 239 aaPredicted RBP21.59■■□□□ 1.05
CBX3-204ENST00000456948 ANKRD10Q9NXR5 420 aa21.59■■□□□ 1.05
CBX3-204ENST00000456948 SHANK1Q9Y566 2161 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 SETXQ7Z333 2677 aaKnown RBP21.58■■□□□ 1.05
CBX3-204ENST00000456948 MYOCOSA0A1B0GUC4 107 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 C1orf226A1L170 272 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 ANKUB1A6NFN9 424 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 TRIM13O60858 407 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 AIFM1O95831 613 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 EDN3P14138 238 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 GALNSP34059 522 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 NR6A1Q15406 480 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 SPIN4Q56A73 249 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 FRMD7Q6ZUT3 714 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 BANPQ8N9N5 519 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 ST6GALNAC3Q8NDV1 305 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 OR4K14Q8NGD5 310 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 SLC2A12Q8TD20 617 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 AGAP11Q8TF27 550 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 RIT1Q92963 219 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 NPAS2Q99743 824 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 TRMOQ9BU70 441 aa21.58■■□□□ 1.05
CBX3-204ENST00000456948 RYDENQ9NUL5 291 aaKnown RBP21.58■■□□□ 1.05
CBX3-204ENST00000456948 GLOD5A6NK44 160 aa21.57■■□□□ 1.04
CBX3-204ENST00000456948 ITGA10O75578 1167 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms