RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MRM1Q6IN84 353 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 METTL4Q8N3J2 472 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 TMEM156Q8N614 296 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 BCORP1Q8N888 145 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 APCDD1LQ8NCL9 501 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 SMC6Q96SB8 1091 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 HBEGFQ99075 208 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 NPAS2Q99743 824 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 ZNF717Q9BY31 904 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 C12orf65Q9H3J6 166 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 KLHL1Q9NR64 748 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 LRFN1Q9P244 771 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 ZNF225Q9UK10 706 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 CLDN16Q9Y5I7 305 aa16.86■□□□□ 0.29
PDLIM2-215ENST00000456545 H3BQF6 201 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 CDK2AP1O14519 115 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 MAN1A2O60476 641 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PRKRAO75569 313 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 ESRRBO95718 433 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 GPR75O95800 540 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 ALOX15P16050 662 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PIK3R1P27986 724 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 DEKP35659 375 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 STT3AP46977 705 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 CYB561P49447 251 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 DNAJB13P59910 316 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 CSTF3Q12996 717 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 TCHHL1Q5QJ38 904 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 SPINK14Q6IE38 97 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 HSDL2Q6YN16 418 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 COMMD6Q7Z4G1 85 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 TRABD2AQ86V40 505 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 GBP7Q8N8V2 638 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PRR7Q8TB68 274 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PTPMT1Q8WUK0 201 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 FAR1Q8WVX9 515 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 TMEM125Q96AQ2 219 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PPWD1Q96BP3 646 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 APOPT1Q96IL0 206 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 ART5Q96L15 291 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PELOQ9BRX2 385 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 GSTO2Q9H4Y5 243 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 OXSMQ9NWU1 459 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 LGALS13Q9UHV8 139 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 NTNG1Q9Y2I2 539 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 PLLPQ9Y342 182 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 TIMM22Q9Y584 194 aa16.85■□□□□ 0.29
PDLIM2-215ENST00000456545 SPAG7O75391 227 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 AIFM1O95831 613 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 CRYABP02511 175 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 UQCRFS1P47985 274 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 BTKQ06187 659 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 INAQ16352 499 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 MAPKAPK3Q16644 382 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 IMPG1Q17R60 797 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 EIF2S3LQ2VIR3 472 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 KRT71Q3SY84 523 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 SPDYAQ5MJ70 313 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 FHL5Q5TD97 284 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 LIPMQ5VYY2 423 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 OR52E8Q6IFG1 317 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 MREGQ8N565 214 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 C1orf52Q8N6N3 182 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 TMEM178AQ8NBL3 297 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 FAM98AQ8NCA5 519 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 OR5L2Q8NGL0 311 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 SLC2A12Q8TD20 617 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 AGAP11Q8TF27 550 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 SREK1Q8WXA9 508 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 SIGLEC12Q96PQ1 595 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 OLAHQ9NV23 265 aa16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 PPIEQ9UNP9 301 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-215ENST00000456545 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 TRIM13O60858 407 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 ITGA10O75578 1167 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 HLCSP50747 726 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SSR4P51571 173 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 GPR143P51810 404 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 IGLV3-21P80748 117 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 MRPL49Q13405 166 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 NDUFAF5Q5TEU4 345 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 C6orf163Q5TEZ5 329 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC25A25Q6KCM7 469 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SCIMPQ6UWF3 145 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 C10orf107Q8IVU9 208 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 ST13P4Q8IZP2 240 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 BANPQ8N9N5 519 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 OR4K14Q8NGD5 310 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 DNAJB8Q8NHS0 232 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 GCN1Q92616 2671 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 RIT1Q92963 219 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SENP5Q96HI0 755 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 KCNA7Q96RP8 456 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 FAIM2Q9BWQ8 316 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SHCBP1LQ9BZQ2 653 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 CENPHQ9H3R5 247 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 LIN28AQ9H9Z2 209 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 TEX10Q9NXF1 929 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 BAHCC1Q9P281 2608 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms