RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 TBC1D25Q3MII6 688 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 C9orf50Q5SZB4 431 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 FAM92BQ6ZTR7 304 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 ADCK2Q7Z695 626 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 GPR32P1Q8NGA4 272 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 GGHQ92820 318 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 SH3YL1Q96HL8 342 aaPredicted RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 DHRS1Q96LJ7 313 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 ZNF607Q96SK3 696 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 KXD1Q9BQD3 176 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 DPH7Q9BTV6 452 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 FAIM2Q9BWQ8 316 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 ITPAQ9BY32 194 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 FBXL12Q9NXK8 326 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 C5AR2Q9P296 337 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 KCNK6Q9Y257 313 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 TMEM247A6NEH6 219 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 K7EQS6 105 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 FFAR1O14842 300 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 MPZL2O60487 215 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 PFDN1O60925 122 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 ZBTB11O95625 1053 aaPredicted RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 AHRP35869 848 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 SSR2P43308 183 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 KCNJ5P48544 419 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 LIM2P55344 173 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 DGCR6Q14129 220 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 KRT33BQ14525 404 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 GANABQ14697 944 aaKnown RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 DGUOKQ16854 277 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 NDUFAF5Q5TEU4 345 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 C16orf87Q6PH81 154 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 SYCE2Q6PIF2 218 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 KLK6Q92876 244 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 SLC38A4Q969I6 547 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 SCARF2Q96GP6 870 aaPredicted RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 ZNF354BQ96LW1 612 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 MYADMQ96S97 322 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 AICDAQ9GZX7 198 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 IGFLR1Q9H665 355 aa14.29□□□□□ -0.12
LDLR-202ENST00000455727 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
LDLR-202ENST00000455727 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 SH3BP5O60239 455 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 SERPINB7O75635 380 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 OXSR1O95747 527 aaPredicted RBP14.28□□□□□ -0.12
LDLR-202ENST00000455727 LCKP06239 509 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 TGFBR2P37173 567 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 SERPINB10P48595 397 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 PTGES3Q15185 160 aaKnown RBP14.28□□□□□ -0.12
LDLR-202ENST00000455727 SLCO6A1Q86UG4 719 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 TAGAPQ8N103 731 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 AMER3Q8N944 861 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 AQP11Q8NBQ7 271 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 DYNC2LI1Q8TCX1 351 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 RAB8BQ92930 207 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 AMDHD1Q96NU7 426 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 C17orf62Q9BQA9 187 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 GLIPR2Q9H4G4 154 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 XKR8Q9H6D3 395 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 NMNAT1Q9HAN9 279 aaPredicted RBP14.28□□□□□ -0.12
LDLR-202ENST00000455727 SLC35C2Q9NQQ7 365 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 FAIMQ9NVQ4 179 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 LMCD1Q9NZU5 365 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 FTSJ1Q9UET6 329 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 CORINQ9Y5Q5 1042 aa14.28□□□□□ -0.12
LDLR-202ENST00000455727 hCG_2014768A0A024R1R8 64 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 SH3D21A4FU49 640 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 ZAR1LA6NP61 321 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 CLDN25C9JDP6 229 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 GUCY1B2O75343 617 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 ADAP00813 363 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 GASTP01350 101 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 CD36P16671 472 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 IGFALSP35858 605 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 SLC19A1P41440 591 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 CDC42P60953 191 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 ZNF846Q147U1 533 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 SLC9A5Q14940 896 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 FRMPD2BQ6IN97 320 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 TCTN3Q6NUS6 607 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 KLHL17Q6TDP4 642 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 TMEM64Q6YI46 380 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 ZNF793Q6ZN11 406 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 TBC1D19Q8N5T2 526 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 UTP15Q8TED0 518 aaKnown RBP14.27□□□□□ -0.12
LDLR-202ENST00000455727 S100ZQ8WXG8 99 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 LGALS12Q96DT0 336 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 APOOQ9BUR5 198 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.12
LDLR-202ENST00000455727 RSPO3Q9BXY4 272 aaPredicted RBP14.27□□□□□ -0.12
LDLR-202ENST00000455727 SERHL2Q9H4I8 314 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 FBRSQ9HAH7 460 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 HMG20AQ9NP66 347 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 P2RX2Q9UBL9 471 aa14.27□□□□□ -0.12
LDLR-202ENST00000455727 TMCC3Q9ULS5 477 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms