RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 UBXN1Q04323 297 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PMPCAQ10713 525 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 FAM53BQ14153 422 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 BTBD16Q32M84 506 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 GXYLT1Q4G148 440 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 DNAJC21Q5F1R6 531 aaKnown RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 GARNL3Q5VVW2 1013 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 RTL6Q6ICC9 239 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ARHGAP11AQ6P4F7 1023 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ZNF449Q6P9G9 518 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 NPNTQ6UXI9 565 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CPEB2Q7Z5Q1 589 aaKnown RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 PCGF5Q86SE9 256 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 SERPINA9Q86WD7 417 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PHC2Q8IXK0 858 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 KLHDC8BQ8IXV7 354 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PIANPQ8IYJ0 282 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 SLC22A15Q8IZD6 547 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ZNF567Q8N184 647 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 FITM2Q8N6M3 262 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 HORMAD2Q8N7B1 307 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ACRBPQ8NEB7 543 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 IPMKQ8NFU5 416 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 GOT1L1Q8NHS2 421 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 M1APQ8TC57 530 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 FAM222BQ8WU58 562 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 OR2A5Q96R48 311 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CYTH2Q99418 400 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 VAT1Q99536 393 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 TTYH2Q9BSA4 534 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 SARGQ9BW04 601 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 VN1R1Q9GZP7 353 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 HSD3B7Q9H2F3 369 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 FAM96AQ9H5X1 160 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ARNT2Q9HBZ2 717 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 BEX4Q9NWD9 120 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 STOX2Q9P2F5 926 aaPredicted RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 TRPC4Q9UBN4 977 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 CDC14AQ9UNH5 594 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 TDRKHQ9Y2W6 561 aaKnown RBP3.43□□□□□ -1.86
RBM39-220ENST00000455343 FAM215AQ9Y5M1 114 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ALG6Q9Y672 507 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 PRSS21Q9Y6M0 314 aa3.43□□□□□ -1.86
RBM39-220ENST00000455343 ANKRD12Q6UB98 2062 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 TRGV11A0A075B6L2 103 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 IGKV1-8A0A0C4DH67 115 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 A0A1B0GVC2 190 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 A0A1W2PPR1 153 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 A0A1W2PPV9 198 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 FEZF1A0PJY2 475 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 USP27XA6NNY8 438 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 H0YGG7 62 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 H0YIG0 161 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 KLRC4-KLRK1H3BQV0 150 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 QSOX1O00391 747 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 APOL1O14791 398 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PRPF4O43172 522 aaKnown RBP eCLIP3.42□□□□□ -1.86
RBM39-220ENST00000455343 GOSR1O95249 250 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 AGTP01019 485 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 IGHG3P01860 377 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 EIF2S1P05198 315 aaKnown RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 UQCRHP07919 91 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PRSS56P0CW18 603 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 SKILP12757 684 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 ZFXP17010 805 aaPredicted RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 ACVR2AP27037 513 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 CCR7P32248 378 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 NR2C2P49116 596 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 CYB561P49447 251 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 AGTR2P50052 363 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PROK1P58294 105 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 ARF3P61204 181 aaPredicted RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 DCAF7P61962 342 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 MAT1AQ00266 395 aaKnown RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 OC90Q02509 493 aaPredicted RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 RELAQ04206 551 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 KLHL30Q0D2K2 578 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 FAPQ12884 760 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 SNTB1Q13884 538 aaKnown RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 KEAP1Q14145 624 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 ITIH4Q14624 930 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 EXT1Q16394 746 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 MAPKAPK3Q16644 382 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 SYT16Q17RD7 645 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 HKDC1Q2TB90 917 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 SLC25A35Q3KQZ1 300 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 FBXL19-AS1Q494R0 122 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 FLYWCH1Q4VC44 716 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 ZNF425Q6IV72 752 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 LRRC8BQ6P9F7 803 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PRSS57Q6UWY2 283 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 UNC5DQ6UXZ4 953 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PACS1Q6VY07 963 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 KIAA0408Q6ZU52 694 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 LANCL3Q6ZV70 420 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 MICALCLQ6ZW33 695 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 BZW1Q7L1Q6 419 aaKnown RBP3.42□□□□□ -1.86
RBM39-220ENST00000455343 PID1Q7Z2X4 250 aa3.42□□□□□ -1.86
RBM39-220ENST00000455343 PAQR7Q86WK9 346 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms