RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ELK3P41970 407 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ASCL1P50553 236 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 HNRNPFP52597 415 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 DGKQP52824 942 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ARL4CP56559 192 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 KCNJ2P63252 427 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 PLIN5Q00G26 463 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 MGAT5Q09328 741 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 FOXO1Q12778 655 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 TSNQ15631 228 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 TBCCQ15814 346 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 PDK4Q16654 411 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 KCTD19Q17RG1 926 aaPredicted RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 AP5B1Q2VPB7 878 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF750Q32MQ0 723 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 FLYWCH1Q4VC44 716 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 PIGGQ5H8A4 983 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 TBCELQ5QJ74 424 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC22A10Q63ZE4 541 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 SULT1C3Q6IMI6 304 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 CHSY3Q70JA7 882 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 MAATS1Q7Z4T9 603 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 WDR53Q7Z5U6 358 aaPredicted RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ZC3HC1Q86WB0 502 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 KIF18BQ86Y91 864 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 LRRC8AQ8IWT6 810 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ZZZ3Q8IYH5 903 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 PM20D2Q8IYS1 436 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 SNX31Q8N9S9 440 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 RNASE6Q93091 150 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 WDR34Q96EX3 536 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 RBM18Q96H35 190 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 DGAT2Q96PD7 388 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 KRT12Q99456 494 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 DERL2Q9GZP9 239 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 AICDAQ9GZX7 198 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ZFP64Q9NPA5 681 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ACKR4Q9NPB9 350 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 RASSF1Q9NS23 344 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 CCM2LQ9NUG4 571 aaPredicted RBP7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ALKBH4Q9NXW9 302 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ADGRE2Q9UHX3 823 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 CHMP2BQ9UQN3 213 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 ATG4BQ9Y4P1 393 aa7.41□□□□□ -1.22
NIF3L1-209ENST00000454952 FREM3P0C091 2139 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 A0A0G2JMM0 328 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 A0A1W2PPB8 328 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 A0A1W2PRS3 328 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 CTAGE15A4D2H0 777 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 A6NNC1 897 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 KIR3DP1A8MWS1 328 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TMEM229AB2RXF0 380 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 G3V3Y1 287 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 STK16O75716 305 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 SCELO95171 688 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 UQCRC1P31930 480 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 RPL21P46778 160 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 STT3AP46977 705 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 DNASE1L1P49184 302 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 DLX5P56178 289 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TAS2R39P59534 338 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 ATP6V0D1P61421 351 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 RPP38P78345 283 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 POU4F1Q01851 419 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 IRF8Q02556 426 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TGFBIQ15582 683 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 OCLNQ16625 522 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF791Q3KP31 576 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 FBXL19-AS1Q494R0 122 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 RTL6Q6ICC9 239 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TRMT10BQ6PF06 316 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 C16orf47Q6ZP98 133 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC29A4Q7RTT9 530 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 CTAGE6Q86UF2 777 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 GAS2L3Q86XJ1 694 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 GPSM1Q86YR5 675 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 LACC1Q8IV20 430 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 IGDCC3Q8IVU1 814 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 CCDC116Q8IYX3 515 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 ACOT4Q8N9L9 421 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TMEM52Q8NDY8 209 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 PAQR8Q8TEZ7 354 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TANKQ92844 425 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 SPACA9Q96E40 222 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 HSPBAP1Q96EW2 488 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 SENP5Q96HI0 755 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 FBXL20Q96IG2 436 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 OSBPL9Q96SU4 736 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 CSF3RQ99062 836 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 RHOJQ9H4E5 214 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF703Q9H7S9 590 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 LIN28AQ9H9Z2 209 aaKnown RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TUBA8Q9NY65 449 aaPredicted RBP7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 TXNDC16Q9P2K2 825 aa7.4□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC17A6Q9P2U8 582 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms