RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CIDEBQ9UHD4 219 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 ATG4BQ9Y4P1 393 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 PCDHGB1Q9Y5G3 927 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 PCDHGA11Q9Y5H2 935 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 CACNA1AO00555 2505 aa4.66□□□□□ -1.66
RIF1-207ENST00000454583 E5RI56 91 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 TO15178 435 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ZNF354AO60765 605 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 SMIM24O75264 130 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CBX7O95931 251 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 THY1P04216 161 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CT62P0C5K7 136 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 SLC35G4P0C7Q5 338 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 JUNBP17275 347 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 CKMT2P17540 419 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CD247P20963 164 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 AKT1P31749 480 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ACTR1BP42025 376 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ACTR1AP61163 376 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 AP2B1P63010 937 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 HMGCS1Q01581 520 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 TNFRSF17Q02223 184 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 NR0B2Q15466 257 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CRTC2Q53ET0 693 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 FAHD1Q6P587 224 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 IGFL2Q6UWQ7 119 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 FKBP9P1Q75LS8 142 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ZZZ3Q8IYH5 903 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 GLB1L3Q8NCI6 653 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 APCDD1LQ8NCL9 501 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CHDHQ8NE62 594 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 PLPP5Q8NEB5 264 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 IFI44Q8TCB0 444 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ADAMTS14Q8WXS8 1223 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 FKBP10Q96AY3 582 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 MVB12AQ96EY5 273 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 USB1Q9BQ65 265 aaKnown RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 DPH2Q9BQC3 489 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 DPH7Q9BTV6 452 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 SPRTNQ9H040 489 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 AKIRIN1Q9H9L7 192 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 C1orf109Q9NX04 203 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CEPT1Q9Y6K0 416 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 NCF1BA6NI72 391 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 A8MVJ9 347 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 NCF1CA8MVU1 366 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 H3BNH8 94 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 H7BY64 318 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 M0QX08 132 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 SLC30A4O14863 429 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 PFDN6O15212 129 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ZNF749O43361 778 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 SRPX2O60687 465 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 KATNA1O75449 491 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 KCNK5O95279 499 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 WISP1O95388 367 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 GUCA1CO95843 209 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 HPRP00739 348 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 UMPSP11172 480 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 NEFHP12036 1026 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 NCF1P14598 390 aaPredicted RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 SLC2A4P14672 509 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 MAGP20916 626 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CHAF1BQ13112 559 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 STX5Q13190 355 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 DPY19L1Q2PZI1 675 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 TRIM61Q5EBN2 209 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 RABL3Q5HYI8 236 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ZC3H12BQ5HYM0 836 aaKnown RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 SAMD4BQ5PRF9 694 aaKnown RBP4.65□□□□□ -1.66
RIF1-207ENST00000454583 SLC2A7Q6PXP3 512 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 FIGLAQ6QHK4 219 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 C19orf48Q6RUI8 117 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 TMIGD1Q6UXZ0 262 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 QSOX2Q6ZRP7 698 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 ZFAND2BQ8WV99 257 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 TANKQ92844 425 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 SPDL1Q96EA4 605 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 IMMP1LQ96LU5 166 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 CCDC74BQ96LY2 380 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 PRAP1Q96NZ9 151 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 MYOCQ99972 504 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 MAPKAP1Q9BPZ7 522 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 INPP5KQ9BT40 448 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 WDR54Q9H977 334 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 C8orf4Q9NR00 106 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 VPS29Q9UBQ0 182 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 KLHL20Q9Y2M5 609 aa4.65□□□□□ -1.66
RIF1-207ENST00000454583 HEATR5AQ86XA9 2040 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 A0A087WV62 115 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 GOLGA8CPA6NN73 597 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 NEMP1O14524 444 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 DSCR3O14972 297 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 PGRMC2O15173 223 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 CAPN5O15484 640 aaPredicted RBP4.65□□□□□ -1.67
RIF1-207ENST00000454583 NDUFS4O43181 175 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 SLC22A3O75751 556 aa4.65□□□□□ -1.67
RIF1-207ENST00000454583 AIFM1O95831 613 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms