RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 LHCGRP22888 699 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 PIK3CBP42338 1070 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 DCDC1P59894 354 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 ATP13A5Q4VNC0 1218 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 LRRC73Q5JTD7 316 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 LRRC66Q68CR7 880 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 ZNF544Q6NX49 715 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 TSSK4Q6SA08 328 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 CCDC190Q86UF4 302 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 OR52N2Q8NGI0 321 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 OR14C36Q8NHC7 312 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 SPPL2AQ8TCT8 520 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 SKA2Q8WVK7 121 aaPredicted RBP12.66□□□□□ -0.38
LINC00343-203ENST00000454555 KCNC2Q96PR1 638 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 EBPLQ9BY08 206 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 CD93Q9NPY3 652 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 SACM1LQ9NTJ5 587 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 AASSQ9UDR5 926 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 CYP8B1Q9UNU6 501 aa12.66□□□□□ -0.38
LINC00343-203ENST00000454555 IGHV1OR15-9A0A0B4J2B8 117 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 MGAT4DA6NG13 374 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 PSMD11O00231 422 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 CCRL2O00421 344 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 SLCO2B1O94956 709 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 LAMP1P11279 417 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 FUT4P22083 530 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 C21orf33P30042 268 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 ACSL1P33121 698 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 SLC19A1P41440 591 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 CASP3P42574 277 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 CSTF1Q05048 431 aaKnown RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 DMWDQ09019 674 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 SLC13A2Q13183 592 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 ZNF630Q2M218 657 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 ZXDCQ2QGD7 858 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 XKR6Q5GH73 641 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 CRB2Q5IJ48 1285 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 TMEM31Q5JXX7 168 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 GCNT6Q5T4J0 391 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 METTL4Q8N3J2 472 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 C1orf52Q8N6N3 182 aaKnown RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 HTRA1Q92743 480 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 SH3KBP1Q96B97 665 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 DPH2Q9BQC3 489 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 OR2B2Q9GZK3 357 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 NUAK2Q9H093 628 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 NFKBIL1Q9UBC1 381 aaPredicted RBP12.65□□□□□ -0.38
LINC00343-203ENST00000454555 ITM2BQ9Y287 266 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.38
LINC00343-203ENST00000454555 MUC3AQ02505 3323 aa12.65□□□□□ -0.39
LINC00343-203ENST00000454555 LRRC72A6NJI9 287 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 GABRR3A8MPY1 467 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PDZK1P1A8MUH7 402 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PRAMEF4O60810 478 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 KCNK2O95069 426 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 B3GALT4O96024 378 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 KRT8P05787 483 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ANXA4P09525 319 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 IDSP22304 550 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SPINT3P49223 89 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CRYBA2P53672 197 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SPIBQ01892 262 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 RHAGQ02094 409 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SEMG2Q02383 582 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PTSQ03393 145 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 AGAP6Q5VW22 663 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PRAMEF9Q5VWM5 478 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 MEDAGQ5VYS4 303 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 UNC5DQ6UXZ4 953 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 LIPIQ6XZB0 460 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TSPAN33Q86UF1 283 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 THOC6Q86W42 341 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CCDC103Q8IW40 242 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 LGI4Q8N135 537 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 SLC5A8Q8N695 610 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 RLN3Q8WXF3 142 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 UBE2FQ969M7 185 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TOE1Q96GM8 510 aaKnown RBP12.64□□□□□ -0.39
LINC00343-203ENST00000454555 Q96MT0 163 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 AGAP4Q96P64 663 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 PIP5K1AQ99755 562 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 POLE4Q9NR33 117 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 CLN6Q9NWW5 311 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 ZNF226Q9NYT6 803 aa12.64□□□□□ -0.39
LINC00343-203ENST00000454555 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms