RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TTC27Q6P3X3 843 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 TIFABQ6ZNK6 161 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 TRMT11Q7Z4G4 463 aaKnown RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 COX8CQ7Z4L0 72 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 TBC1D10CQ8IV04 446 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF781Q8N8C0 355 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CLEC1AQ8NC01 280 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF564Q8TBZ8 553 aaPredicted RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 PCNPQ8WW12 178 aaKnown RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 NTNG2Q96CW9 530 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 RBM18Q96H35 190 aaKnown RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 RBM41Q96IZ5 413 aaKnown RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 MCCC1Q96RQ3 725 aaPredicted RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CCT8L2Q96SF2 557 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 GOLPH3LQ9H4A5 285 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CYTL1Q9NRR1 136 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CLIC5Q9NZA1 410 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 TMEM9Q9P0T7 183 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 ARMCX1Q9P291 453 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 SATB2Q9UPW6 733 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 MOKQ9UQ07 419 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 HBS1LQ9Y450 684 aaKnown RBP1.35□□□□□ -2.19
LRCH3-209ENST00000452660 COLEC10Q9Y6Z7 277 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 PRXQ9BXM0 1461 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 MBD5Q9P267 1494 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 NRXN1Q9ULB1 1477 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 WNK3Q9BYP7 1800 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 ARFGEF1Q9Y6D6 1849 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CFAP54Q96N23 3096 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 NHSQ6T4R5 1651 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 CHD8Q9HCK8 2581 aa1.35□□□□□ -2.19
LRCH3-209ENST00000452660 KIAA0232Q92628 1395 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 COL18A1P39060 1754 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 DCHS1Q96JQ0 3298 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 HTTP42858 3142 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 HFM1A2PYH4 1435 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 CLIP1P30622 1438 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 EEA1Q15075 1411 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 ZDBF2Q9HCK1 2354 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 WDFY4Q6ZS81 3184 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TMEM150CB9EJG8 249 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TRIM49D1C9J1S8 452 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 NPIPA3F8WFD2 350 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 PANO1I0J062 215 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 MAGEB4O15481 346 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 PENKP01210 267 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 ABCB1P08183 1280 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 ALOX12P18054 663 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 GDF1P27539 372 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 LIG4P49917 911 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 CLNS1AP54105 237 aaKnown RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 GEMIN4P57678 1058 aaKnown RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TLE4Q04727 773 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 OVGP1Q12889 678 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 WTAPQ15007 396 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF658BQ4V348 819 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 RFTN2Q52LD8 501 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 HSP90AB4PQ58FF6 505 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 C2orf66Q6UXQ4 117 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 CAMKMTQ7Z624 323 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 LINC00346Q8IVM7 164 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 NAXDQ8IW45 347 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TAGAPQ8N103 731 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TC2NQ8N9U0 490 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 CCDC63Q8NA47 563 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 ZNF721Q8TF20 911 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 GRK7Q8WTQ7 553 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 PYCR2Q96C36 320 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 OTUB1Q96FW1 271 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 IMMP1LQ96LU5 166 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 C10orf88Q9H8K7 445 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 CNOT10Q9H9A5 744 aaKnown RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 MTF2Q9Y483 593 aaPredicted RBP1.34□□□□□ -2.19
LRCH3-209ENST00000452660 PLEKHH2Q8IVE3 1493 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 FYCO1Q9BQS8 1478 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 USP54Q70EL1 1684 aa1.34□□□□□ -2.19
LRCH3-209ENST00000452660 TOGARAM1Q9Y4F4 1720 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 ASTN1O14525 1302 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 C5orf42Q9H799 3197 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 MTUS2Q5JR59 1369 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 PIK3R4Q99570 1358 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 KIF15Q9NS87 1388 aa1.34□□□□□ -2.2
LRCH3-209ENST00000452660 KIF13BQ9NQT8 1826 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 CRB1P82279 1406 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ERBINQ96RT1 1412 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TRPM7Q96QT4 1865 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ALS2Q96Q42 1657 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 AKAP11Q9UKA4 1901 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TRPM3Q9HCF6 1732 aaPredicted RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 IGHV3-35A0A0C4DH35 117 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 TEX48A0A1B0GUV7 120 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 LOC390937A0A1W2PQ73 354 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 ZFP92A6NM28 416 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 KIF5CO60282 957 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 DOK2O60496 412 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 STAM2O75886 525 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 LUC7L3O95232 432 aaKnown RBP1.33□□□□□ -2.2
LRCH3-209ENST00000452660 MT-ND2P03891 347 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 IST1P53990 364 aa1.33□□□□□ -2.2
LRCH3-209ENST00000452660 IL10RBQ08334 325 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms