RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 NCLNQ969V3 563 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 EXOSC8Q96B26 276 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 RNF145Q96MT1 663 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 BTBD9Q96Q07 612 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 FAIM2Q9BWQ8 316 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CHID1Q9BWS9 393 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 UGT2B28Q9BY64 529 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SIRT3Q9NTG7 399 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ACSS1Q9NUB1 689 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ACSL6Q9UKU0 697 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ATG4BQ9Y4P1 393 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 N6AMT1Q9Y5N5 214 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CACNA1HO95180 2353 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 FAM149AA5PLN7 773 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 WASHC1A8K0Z3 465 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 H0YGG7 62 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 PROM1O43490 865 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 GUCY1B2O75343 617 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 MTRF1O75570 445 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 PRKD3O94806 890 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 AIFM1O95831 613 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SERPINA1P01009 418 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 NTRK1P04629 796 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ENPP1P22413 925 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 PCGF2P35227 344 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 TSPAN7P41732 249 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 VSX2P58304 361 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ARF3P61204 181 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 FADDQ13158 208 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 FAM98BQ52LJ0 330 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SNAP47Q5SQN1 464 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 EPHX4Q8IUS5 362 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 C19orf47Q8N9M1 422 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CAMKVQ8NCB2 501 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ICA1LQ8NDH6 482 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 OR5AK3PQ8NH89 298 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SAP25Q8TEE9 199 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 KLHL6Q8WZ60 621 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 POP5Q969H6 163 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 EME1Q96AY2 570 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 AHCYL2Q96HN2 611 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ASPSCR1Q9BZE9 553 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 SEMA6CQ9H3T2 930 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 MAGIXQ9H6Y5 334 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 COQ10BQ9H8M1 238 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CAPN10Q9HC96 672 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 LYARQ9NX58 379 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 TMEM9Q9P0T7 183 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CES1P1Q9UKY3 287 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 MRPS2Q9Y399 296 aaKnown RBP7.81□□□□□ -1.16
NECAP1-202ENST00000450991 CSNK1G3Q9Y6M4 447 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ASXL3Q9C0F0 2248 aa7.81□□□□□ -1.16
NECAP1-202ENST00000450991 ARID1BQ8NFD5 2236 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 CPED1A4D0V7 1026 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 ZNF860A6NHJ4 632 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 GLOD5A6NK44 160 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 H0YJX3 145 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 BOLA2-SMG1P6H3BVE0 249 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 PGRMC2O15173 223 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SIGLEC6O43699 453 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 PRSS23O95084 383 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 MT-ND1P03886 318 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 ETFAP13804 333 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 UQCRBP14927 111 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 MANFP55145 182 aaKnown RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 BTN3A2P78410 334 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 CHRNB3Q05901 458 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 VAC14Q08AM6 782 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 INTS11Q5TA45 600 aaKnown RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SAXO2Q658L1 398 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 C18orf63Q68DL7 685 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 KLHL35Q6PF15 583 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 KANSL1Q7Z3B3 1105 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SPRED1Q7Z699 444 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 RNF130Q86XS8 419 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 EID3Q8N140 333 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 NEURL3Q96EH8 262 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 ZBED6CLQ96FA7 236 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SLC47A1Q96FL8 570 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SLC29A1Q99808 456 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 CIB1Q99828 191 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SH3GL3Q99963 347 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 MAPKAP1Q9BPZ7 522 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 TMEM121BQ9BXQ6 578 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-202ENST00000450991 ARRDC1-AS1Q9H2J1 176 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 GLIPR2Q9H4G4 154 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 RAD21L1Q9H4I0 556 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 TMEM38AQ9H6F2 299 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 NEUROD4Q9HD90 331 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 SLC35C2Q9NQQ7 365 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 UTS2RQ9UKP6 389 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 FBXW2Q9UKT8 454 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 PADI4Q9UM07 663 aa7.8□□□□□ -1.16
NECAP1-202ENST00000450991 NUP210LQ5VU65 1888 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms