RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MTFMTQ96DP5 389 aaKnown RBP14.19□□□□□ -0.14
CHD3-205ENST00000449744 ART5Q96L15 291 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 CDK15Q96Q40 435 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 RASL10BQ96S79 203 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 SERPINI1Q99574 410 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 MRPL57Q9BQC6 102 aaKnown RBP14.19□□□□□ -0.14
CHD3-205ENST00000449744 MRPL46Q9H2W6 279 aaKnown RBP14.19□□□□□ -0.14
CHD3-205ENST00000449744 PSD3Q9NYI0 1048 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 TINAGQ9UJW2 476 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 NFU1Q9UMS0 254 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 ZNF835Q9Y2P0 537 aa14.19□□□□□ -0.14
CHD3-205ENST00000449744 TMEM200CA6NKL6 621 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 OR7A17O14581 309 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 OR6B1O95007 311 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 ETHE1O95571 254 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 FAM58BPP0C7Q3 252 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 ALOX15P16050 662 aaPredicted RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 RFC3P40938 356 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 SOX3P41225 446 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 HK2P52789 917 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 HNRNPH2P55795 449 aaKnown RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 RNF4P78317 190 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 FOLH1Q04609 750 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 RNFT1Q5M7Z0 435 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 Q6ZPB1 254 aaPredicted RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 MILR1Q7Z6M3 343 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 SLC34A3Q8N130 599 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 ZNF808Q8N4W9 903 aaPredicted RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 ZNF321PQ8N8H1 164 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 PSD4Q8NDX1 1056 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 OR52B6Q8NGF0 335 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 PPWD1Q96BP3 646 aaKnown RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 PELOQ9BRX2 385 aaKnown RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 DDX31Q9H8H2 851 aaKnown RBP14.18□□□□□ -0.14
CHD3-205ENST00000449744 PCTPQ9UKL6 214 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 ATG4BQ9Y4P1 393 aa14.18□□□□□ -0.14
CHD3-205ENST00000449744 UTP20O75691 2785 aaKnown RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 MYO7BQ6PIF6 2116 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 A0A0A6YYD5 115 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 PRRG2O14669 202 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 PROM1O43490 865 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 OR10H2O60403 315 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 CDC40O60508 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD3-205ENST00000449744 EEDO75530 441 aaKnown RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 PRKRAO75569 313 aaKnown RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 NR2F6P10588 404 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 BSGP35613 385 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 SMSP52788 366 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 IGLV3-21P80748 117 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 HSF1Q00613 529 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 PLGLB1Q02325 96 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 IFT88Q13099 833 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 ART3Q13508 389 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 TEX35Q5T0J7 233 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 C10orf62Q5T681 223 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 FRG2Q64ET8 278 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 SP5Q6BEB4 398 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 OPN5Q6U736 354 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 TRMT10CQ7L0Y3 403 aaKnown RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 ZFP62Q8NB50 900 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 ZNF721Q8TF20 911 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 SENP5Q96HI0 755 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 FRG2BQ96QU4 278 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 NTMT1Q9BV86 223 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 CNPPD1Q9BV87 410 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 SEMA4BQ9NPR2 832 aaPredicted RBP14.17□□□□□ -0.14
CHD3-205ENST00000449744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD3-205ENST00000449744 AHSPQ9NZD4 102 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 PPT2Q9UMR5 302 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 ENTPD4Q9Y227 616 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 ASB4Q9Y574 426 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 MYO9AB2RTY4 2548 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 UNC79Q9P2D8 2635 aa14.17□□□□□ -0.14
CHD3-205ENST00000449744 CACNA1DQ01668 2161 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 ARHGAP10A1A4S6 786 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 ACOT7O00154 380 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 TMPRSS11DO60235 418 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 HS6ST1O60243 411 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 SEMA3DO95025 777 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 GPR75O95800 540 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 GBAP04062 536 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 ABHD2P08910 425 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 MRM1Q6IN84 353 aaKnown RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 XKRXQ6PP77 449 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 PAOXQ6QHF9 649 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 RTL4Q6ZR62 310 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 EID3Q8N140 333 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 C16orf52Q8NHV5 167 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 MTBPQ96DY7 904 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 NSUN5Q96P11 429 aaKnown RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 ZNF717Q9BY31 904 aaPredicted RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 ELOVL6Q9H5J4 265 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 ZBTB26Q9HCK0 441 aa14.16□□□□□ -0.14
CHD3-205ENST00000449744 KLF2Q9Y5W3 355 aaPredicted RBP14.16□□□□□ -0.14
CHD3-205ENST00000449744 IQANK1A0A1B0GTG1 560 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms