RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LPAR4Q99677 370 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 TRMOQ9BU70 441 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 EHD1Q9H4M9 534 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 THAP1Q9NVV9 213 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 RAP2CQ9Y3L5 183 aa12.88□□□□□ -0.35
PDLIM2-213ENST00000448520 AZIN1O14977 448 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 UGDHO60701 494 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SLC19A2O60779 497 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SKAP2O75563 359 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SERPIND1P05546 499 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 ENO1P06733 434 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SLC35G6P0C7Q6 338 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 HMOX2P30519 316 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SERPINB5P36952 375 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 CD96P40200 585 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 HNF4AP41235 474 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SCTRP47872 440 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TAS2R50P59544 299 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 NAA20P61599 178 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 HERC3Q15034 1050 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 UGT3A2Q3SY77 523 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 GGTA1PQ4G0N0 100 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 PRSS41Q7RTY9 318 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 GDF7Q7Z4P5 450 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 LAS2Q8IYD9 372 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 LGI4Q8N135 537 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 KCT2Q8NC54 265 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 MDS2Q8NDY4 140 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 OR7G3Q8NG95 312 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 METTL6Q8TCB7 284 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 CCT6BQ92526 530 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 PPP1R36Q96LQ0 422 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 MTERF1Q99551 399 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 SARGQ9BW04 601 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 AICDAQ9GZX7 198 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TUBB1Q9H4B7 451 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 EML4Q9HC35 981 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 HCN3Q9P1Z3 774 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 ZNF835Q9Y2P0 537 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
PDLIM2-213ENST00000448520 CACNA1CQ13936 2221 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 ASPDHA6ND91 283 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 MAGEB17A8MXT2 336 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 EDF1O60869 148 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 ETHE1O95571 254 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 PDYNP01213 254 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 VIMP08670 466 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 COX6B1P14854 86 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 GRNP28799 593 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 RPL14P50914 215 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 SEC24CP53992 1094 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 LAPTM5Q13571 262 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 PWP1Q13610 501 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 OR1C1Q15619 314 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 PDCD2Q16342 344 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 SFT2D3Q587I9 215 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 FRG2Q64ET8 278 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 FCRLBQ6BAA4 426 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 PAPD4Q6PIY7 484 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 Q6ZPB1 254 aaPredicted RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 MAVSQ7Z434 540 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 SPPL2CQ8IUH8 684 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 CRLF3Q8IUI8 442 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 TBC1D19Q8N5T2 526 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 HUS1BQ8NHY5 278 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 WDR20Q8TBZ3 569 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 SCMH1Q96GD3 660 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 GPR137Q96N19 417 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 FRG2BQ96QU4 278 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 CCDC134Q9H6E4 229 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 CLK4Q9HAZ1 481 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 GIMAP2Q9UG22 337 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 NAALAD2Q9Y3Q0 740 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
PDLIM2-213ENST00000448520 OR2W5A6NFC9 320 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 H0YIV9 168 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 PIP5K1BO14986 540 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 RDH16O75452 317 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 TBX6O95947 436 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms