RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SELENOMQ8WWX9 145 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 PPWD1Q96BP3 646 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 RBM18Q96H35 190 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF382Q96SR6 550 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 OR8D2Q9GZM6 311 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 C12orf65Q9H3J6 166 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 TRIM45Q9H8W5 580 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 LIN28AQ9H9Z2 209 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 AHSPQ9NZD4 102 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 GRID1Q9ULK0 1009 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SNX6Q9UNH7 406 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC12A4Q9UP95 1085 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 EML6Q6ZMW3 1958 aa11.86□□□□□ -0.51
PRPF40A-203ENST00000448428 FCHO1O14526 889 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 PGRMC2O15173 223 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 PLIN3O60664 434 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CDH16O75309 829 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 ITGA10O75578 1167 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 WISP2O76076 250 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 AGFG2O95081 481 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 GPR75O95800 540 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 MLYCDO95822 493 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 AIFM1O95831 613 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CRYABP02511 175 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 SP1P08047 785 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 MYL2P10916 166 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 KRT4P19013 534 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 MST1P26927 711 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 STT3AP46977 705 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 TDGF1P3P51864 188 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC18A2Q05940 514 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 GALNT1Q10472 559 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 TBL3Q12788 808 aaKnown RBP11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 MAPKAPK3Q16644 382 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CCNYL2Q5T2Q4 361 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC25A25Q6KCM7 469 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 WDR93Q6P2C0 686 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 HSDL2Q6YN16 418 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 HORMAD2Q8N7B1 307 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CCNYL1Q8N7R7 359 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC2A12Q8TD20 617 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 ZNF721Q8TF20 911 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 NR4A3Q92570 626 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CCDC126Q96EE4 140 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 SENP5Q96HI0 755 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 C5orf34Q96MH7 638 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 DGAT2Q96PD7 388 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 HBEGFQ99075 208 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 GSTO2Q9H4Y5 243 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 BRF2Q9HAW0 419 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 ADAM29Q9UKF5 820 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 CROCCQ5TZA2 2017 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
PRPF40A-203ENST00000448428 ESPNB1AK53 854 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 HRKO00198 91 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 UBFD1O14562 309 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 COPEO14579 308 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 SLC25A12O75746 678 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 OR2J2O76002 312 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 KRT6AP02538 564 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 KRT6BP04259 564 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 NUDT17P0C025 328 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 NR2F6P10588 404 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 CHN1P15882 459 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 ALOX15P16050 662 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 KRT6CP48668 564 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 LCP2Q13094 533 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 ERCC6LQ2NKX8 1250 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 CCDC153Q494R4 210 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 PAGE2Q7Z2X7 111 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 COMMD6Q7Z4G1 85 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 GALNTL5Q7Z4T8 443 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 TMEM156Q8N614 296 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 TMEM178AQ8NBL3 297 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 METTL6Q8TCB7 284 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 WDR41Q9HAD4 459 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 NMRK1Q9NWW6 199 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 MYOTQ9UBF9 498 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 YARS2Q9Y2Z4 477 aaKnown RBP11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 TIMM22Q9Y584 194 aa11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 RP1L1Q8IWN7 2480 aaPredicted RBP11.84□□□□□ -0.51
PRPF40A-203ENST00000448428 PRRC2CQ9Y520 2896 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 A0A1W2PS29 197 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 WWP2O00308 870 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 NME2P1O60361 137 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 ULK1O75385 1050 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 ESRRBO95718 433 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 IGKV3-11P04433 115 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HSD3B1P14060 373 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms