RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BRSK1Q8TDC3 778 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 GRHL3Q8TE85 626 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 HSD17B8Q92506 261 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 PHYHIPQ92561 330 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SENP5Q96HI0 755 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF354BQ96LW1 612 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SECISBP2Q96T21 854 aaKnown RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 MRPL13Q9BYD1 178 aaKnown RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 NCOR1P1Q9H4R4 102 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 COG4Q9H9E3 785 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 FGF21Q9NSA1 209 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC7A7Q9UM01 511 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMED5Q9Y3A6 229 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SPACA6W5XKT8 324 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 NSD2O96028 1365 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 MROH2BQ7Z745 1585 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 SURF6O75683 361 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 KIAA0754O94854 1291 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 NR3C1P04150 777 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 UGT2B4P06133 528 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ERVK-10P10266 1014 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 PAX7P23759 505 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 DPP4P27487 766 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 HTR2AP28223 471 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 PTPN6P29350 595 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 PPP2R1AP30153 589 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 MTIF2P46199 727 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ATP5OP48047 213 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC1A6P48664 564 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 TNFRSF17Q02223 184 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 SP3Q02447 781 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 GABPAQ06546 454 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 NME3Q13232 169 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 BTG3Q14201 252 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 HEPACAMQ14CZ8 416 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 GPR33Q49SQ1 333 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 LIPKQ5VXJ0 399 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 TPGS2Q68CL5 300 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF776Q68DI1 518 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 SNRNP48Q6IEG0 339 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 PMF1Q6P1K2 205 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 LRRC8BQ6P9F7 803 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 CYP4V2Q6ZWL3 525 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 TAS2R42Q7RTR8 314 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF329Q86UD4 541 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR4C15Q8NGM1 316 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR6M1Q8NGM8 313 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR4L1Q8NH43 312 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 GANCQ8TET4 914 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 MCHR2Q969V1 340 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF501Q96CX3 271 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 C4orf36Q96KX1 117 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 CNOT6LQ96LI5 555 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 CXorf58Q96LI9 332 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 BTBD9Q96Q07 612 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 FUNDC2Q9BWH2 189 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 GCOM2Q9BZD3 368 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 LAT2Q9GZY6 243 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 MTIF3Q9H2K0 278 aaKnown RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 SDR39U1Q9NRG7 319 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 EXOC1Q9NV70 894 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 PILRAQ9UKJ1 303 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 FOXJ3Q9UPW0 622 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 ETV7Q9Y603 341 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 COLEC10Q9Y6Z7 277 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 CHD1O14646 1710 aa3.95□□□□□ -1.78
HMGB1P48-201ENST00000446155 EIF4G3O43432 1585 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 SRCAPQ6ZRS2 3230 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ATP6AP2A0A1C7CYW4 349 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 A0A1W2PN81 502 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 A8MUI8 341 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZNF732B4DXR9 585 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM72CH0Y354 149 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 KIF5CO60282 957 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR4F21O95013 312 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 APRTP07741 180 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 HIST1H2AGP0C0S8 130 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 FRMD6-AS1P0C7T7 363 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CA4P22748 312 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 LHCGRP22888 699 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 MT3P25713 68 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 RBMS1P29558 406 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 ALDH4A1P30038 563 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CHRNA7P36544 502 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 DLSTP36957 453 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 PTGFRP43088 359 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 GPR50Q13585 617 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CEACAM7Q14002 265 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMEM132DQ14C87 1099 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 EXOSC7Q15024 291 aaKnown RBP3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 HERC3Q15034 1050 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CCDC57Q2TAC2 916 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 CFAP221Q4G0U5 840 aa3.94□□□□□ -1.78
HMGB1P48-201ENST00000446155 FAM72AQ5TYM5 149 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms