RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 OTOP2Q7RTS6 562 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 ZNF565Q8N9K5 539 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 FANK1Q8TC84 345 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 NSMAFQ92636 917 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 FEVQ99581 238 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 REEP4Q9H6H4 257 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 CD300AQ9UGN4 299 aa17.88■□□□□ 0.45
SHANK3-203ENST00000445220 A0A1B0GVT2 93 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SORBS2O94875 1100 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 F2P00734 622 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 RHCEP18577 417 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 RPL17P18621 184 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ADH7P40394 386 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ILF3Q12906 894 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 CHAF1BQ13112 559 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SF3A2Q15428 464 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 CGB2Q6NT52 195 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SLC25A36Q96CQ1 311 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 LRR1Q96L50 414 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 OR5B12Q96R08 314 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 EPYCQ99645 322 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 HDHD5Q9BXW7 423 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 RBCK1Q9BYM8 510 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ACOT13Q9NPJ3 140 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 TAS2R8Q9NYW2 309 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 WASH3PC4AMC7 463 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SC5DO75845 299 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 TFP02787 698 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 UQCRC2P22695 453 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SOX2P48431 317 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ENPP2Q13822 863 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 POU4F3Q15319 338 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 OR5H6Q8NGV6 325 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 PHB2Q99623 299 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 MCHR1Q99705 422 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 NUBP2Q9Y5Y2 271 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 TEX51A0A1B0GUA7 166 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 NUPL2O15504 423 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 MITFO75030 526 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 CXCR1P25024 350 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 HSD11B1P28845 292 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 RPS13P62277 151 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 NIPAL4Q0D2K0 466 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 EIF4HQ15056 248 aaKnown RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 METTL11BQ5VVY1 283 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 KLBQ86Z14 1044 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 KRTCAP2Q8N6L1 136 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 LAMP5Q9UJQ1 280 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ACSL5Q9ULC5 683 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 PCDHB14Q9Y5E9 798 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 PRKCGP05129 697 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 CREB5Q02930 508 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ODF4Q2M2E3 257 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 AMZ2Q86W34 360 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 SIMC1Q8NDZ2 872 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 OR14C36Q8NHC7 312 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ADAMTS19Q8TE59 1207 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 OR2AG1Q9H205 316 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
SHANK3-203ENST00000445220 ZBTB20Q9HC78 741 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 TEX10Q9NXF1 929 aaPredicted RBP17.87■□□□□ 0.45
SHANK3-203ENST00000445220 OR6C74A6NCV1 312 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 H7C417 338 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ARPC5O15511 151 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 GM2AP17900 193 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ETV4P43268 484 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 KEAP1Q14145 624 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 MINDY4Q4G0A6 757 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 BBS10Q8TAM1 723 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 YIPF1Q9Y548 306 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ERI3O43414 337 aaKnown RBP17.86■□□□□ 0.45
SHANK3-203ENST00000445220 MRPL3P09001 348 aaKnown RBP17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ATP5A1P25705 553 aaKnown RBP17.86■□□□□ 0.45
SHANK3-203ENST00000445220 CSKP41240 450 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ZNF616Q08AN1 781 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 MS4A15Q8N5U1 240 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 OR4K1Q8NGD4 311 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 RHOXF1Q8NHV9 184 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 FRS2Q8WU20 508 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 NPY6RQ99463 290 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 PRRG4Q9BZD6 226 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ANKRD66B4E2M5 251 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 PRAF2O60831 178 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 RETP07949 1114 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 BCKDHAP12694 445 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 GNMTQ14749 295 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 CYP27C1Q4G0S4 372 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 TMEM135Q86UB9 458 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ACBD7Q8N6N7 88 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 GMLQ99445 158 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ITGA5P08648 1049 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 RPS2P15880 293 aaKnown RBP17.86■□□□□ 0.45
SHANK3-203ENST00000445220 GRIN2CQ14957 1233 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 PCBP2Q15366 365 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■■□□ 17.9
SHANK3-203ENST00000445220 CCL14Q16627 93 aa17.86■□□□□ 0.45
SHANK3-203ENST00000445220 ZNF792Q3KQV3 632 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms