RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SLC25A18Q9H1K4 315 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 CLK4Q9HAZ1 481 aaKnown RBP16.2■□□□□ 0.18
LIME1-202ENST00000444951 IL17BQ9UHF5 180 aa16.2■□□□□ 0.18
LIME1-202ENST00000444951 FER1L5A0AVI2 2057 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MYOCOSA0A1B0GUC4 107 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 BMP10O95393 424 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 ZGLP1P0C6A0 271 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 PRKAR1AP10644 381 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 PRPS2P11908 318 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 STAT5AP42229 794 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 RPS18P62269 152 aaKnown RBP16.19■□□□□ 0.18
LIME1-202ENST00000444951 TRA2BP62995 288 aaKnown RBP16.19■□□□□ 0.18
LIME1-202ENST00000444951 NCF4Q15080 339 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 NKG7Q16617 165 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 SMU1Q2TAY7 513 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 ATP1A1-AS1Q5TC04 95 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 FAAH2Q6GMR7 532 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 OGFOD2Q6N063 350 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 LAPTM4BQ86VI4 370 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 PTRH1Q86Y79 214 aaKnown RBP16.19■□□□□ 0.18
LIME1-202ENST00000444951 FKBP10Q96AY3 582 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 FAIM2Q9BWQ8 316 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 WDR41Q9HAD4 459 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MYNNQ9NPC7 610 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 AIG1Q9NVV5 245 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MS4A12Q9NXJ0 267 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 C5AR2Q9P296 337 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 HEY2Q9UBP5 337 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MKL2Q9ULH7 1088 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MRPS33Q9Y291 106 aaKnown RBP16.19■□□□□ 0.18
LIME1-202ENST00000444951 PTRH2Q9Y3E5 179 aaKnown RBP16.19■□□□□ 0.18
LIME1-202ENST00000444951 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
LIME1-202ENST00000444951 MAST4O15021 2626 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ZNF891A8MT65 544 aaPredicted RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 CYR61O00622 381 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 PGRMC2O15173 223 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 SNX3O60493 162 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ONECUT2O95948 504 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 RPS15P62841 145 aaKnown RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 BTG2P78543 158 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ID2Q02363 134 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 KLC1Q07866 573 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 SLC13A2Q13183 592 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 KCNAB2Q13303 367 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 DNASE1L3Q13609 305 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ANKRD26P1Q6NSI1 321 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 MRPL14Q6P1L8 145 aaKnown RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 ZNF517Q6ZMY9 492 aaPredicted RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 OR4N5Q8IXE1 308 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ADAMTS18Q8TE60 1221 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 NUDT8Q8WV74 236 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 RPF2Q9H7B2 306 aaKnown RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 GPN2Q9H9Y4 310 aaPredicted RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 PRTFDC1Q9NRG1 225 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 ASIC5Q9NY37 505 aa16.18■□□□□ 0.18
LIME1-202ENST00000444951 MRPS18BQ9Y676 258 aaKnown RBP16.18■□□□□ 0.18
LIME1-202ENST00000444951 FLNCQ14315 2725 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 C9JVG2 144 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 LDB3O75112 727 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 ALBP02768 609 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 HEXBP07686 556 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 SFTPCP11686 197 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 IDO1P14902 403 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 MAOAP21397 527 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 JAK1P23458 1154 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 F8A1P23610 371 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 ASMTP46597 345 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 STX1BP61266 288 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 HEPACAMQ14CZ8 416 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 FAM71E1Q6IPT2 247 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 FAM180BQ6P0A1 224 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 PARP9Q8IXQ6 854 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 KIAA1143Q96AT1 154 aaPredicted RBP16.17■□□□□ 0.18
LIME1-202ENST00000444951 EXOSC8Q96B26 276 aaKnown RBP16.17■□□□□ 0.18
LIME1-202ENST00000444951 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 CRB3Q9BUF7 120 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 DPY30Q9C005 99 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 MIEF1Q9NQG6 463 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 LANCL2Q9NS86 450 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 C14orf105Q9NVL8 296 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 C3orf18Q9UK00 162 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 TRIM33Q9UPN9 1127 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 FARSAQ9Y285 508 aaKnown RBP16.17■□□□□ 0.18
LIME1-202ENST00000444951 PCDHA9Q9Y5H5 950 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 GPR45Q9Y5Y3 372 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 SCN2AQ99250 2005 aa16.17■□□□□ 0.18
LIME1-202ENST00000444951 IGLV3-12A0A075B6K2 115 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 C1orf226A1L170 272 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 CLDN4O14493 209 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 PRMT3O60678 531 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 ERAL1O75616 437 aaKnown RBP16.16■□□□□ 0.18
LIME1-202ENST00000444951 FAM107AO95990 144 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 C8orf89P0DMQ9 161 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 ACPPP15309 386 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 IL10P22301 178 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 HPCAL1P37235 193 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 FOLR3P41439 243 aa16.16■□□□□ 0.18
LIME1-202ENST00000444951 UFM1P61960 85 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms