RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ATP6V1DQ9Y5K8 247 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 AFDNP55196 1824 aaKnown RBP3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 STRCP1A6NGW2 1772 aa3.76□□□□□ -1.81
HMGB3P6-201ENST00000444896 CCDC171Q6TFL3 1326 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 PCNX3Q9H6A9 2034 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 IGHV3-20A0A0C4DH32 117 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 A0A0J9YWU9 116 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 GTPBP10A4D1E9 387 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SERINC4A6NH21 518 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SRRM4A7MD48 611 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 E9PQ18 207 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC33A1O00400 549 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 GLCEO94923 617 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 C4BPBP20851 252 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATP5DP30049 168 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 FEN1P39748 380 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 CLCN4P51793 760 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 AKAP17AQ02040 695 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC39A6Q13433 755 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 GCKRQ14397 625 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TAF1BQ53T94 588 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TCEAL6Q6IPX3 200 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC27A4Q6P1M0 643 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 CWC27Q6UX04 472 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 C3P1Q6ZMU1 363 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 MACC1Q6ZN28 852 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 GDPGP1Q6ZNW5 385 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TOM1L2Q6ZVM7 507 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 UNC5CLQ8IV45 518 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 KLHDC8AQ8IYD2 350 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF440Q8IYI8 595 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMEM99Q8N816 258 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SMYD1Q8NB12 490 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 RPLP0P6Q8NHW5 317 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 RFT1Q96AA3 541 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 VMP1Q96GC9 406 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 PCDHB18PQ96TA0 734 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 CABLES2Q9BTV7 478 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 IDI2Q9BXS1 227 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 UPF3BQ9BZI7 483 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 ABCB8Q9NUT2 735 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 HMG20BQ9P0W2 317 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 NOL7Q9UMY1 257 aaKnown RBP3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 PLCL2Q9UPR0 1127 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 SMC3Q9UQE7 1217 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 TMED7Q9Y3B3 224 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 ARFGEF2Q9Y6D5 1785 aa3.75□□□□□ -1.81
HMGB3P6-201ENST00000444896 COL5A2P05997 1499 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 PAPPAQ13219 1627 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 UBR2Q8IWV8 1755 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 A0A087X0K7 114 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 A0A0A6YYC8 382 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 I3L1I5 382 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 SIGLEC5O15389 551 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 TTI1O43156 1089 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 FMO6PO60774 539 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATP9AO75110 1047 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 IGKV5-2P06315 115 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 C8orf89P0DMQ9 161 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 GLI3P10071 1580 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 CTNNA2P26232 953 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 GPR183P32249 361 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 CTNNA1P35221 906 aaKnown RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ADARP55265 1226 aaKnown RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 C17orf67Q0P5P2 114 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZNF177Q13360 481 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 AGAP6Q5VW22 663 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 LCLAT1Q6UWP7 414 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 C17orf107Q6ZR85 190 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 Q6ZVQ6 151 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 COPS6Q7L5N1 327 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ZFAND4Q86XD8 727 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 CLYBLQ8N0X4 340 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 OR10G7Q8NGN6 311 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ATP8B4Q8TF62 1192 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 PTP4A1Q93096 173 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 SLC35C1Q96A29 364 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 PANX3Q96QZ0 392 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ABCA3Q99758 1704 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 TRIM15Q9C019 465 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 EGLN1Q9GZT9 426 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 PARLQ9H300 379 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 ARGLU1Q9NWB6 273 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 BAIAP2L1Q9UHR4 511 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 MRPS18CQ9Y3D5 142 aaKnown RBP3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 MED23Q9ULK4 1368 aa3.74□□□□□ -1.81
HMGB3P6-201ENST00000444896 NUP188Q5SRE5 1749 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 XIRP1Q702N8 1843 aaKnown RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SPEF2Q9C093 1822 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 MAGEB16A2A368 324 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 SHISA7A6NL88 538 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 M0R296 226 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 P2RX6O15547 441 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RAD51DO75771 328 aa3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 LETM1O95202 739 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P6-201ENST00000444896 RPLP0P05388 317 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms