RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 NUDT13Q86X67 352 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 SULF2Q8IWU5 870 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 ZNF321PQ8N8H1 164 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 POGLUT1Q8NBL1 392 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 MTBPQ96DY7 904 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 NSUN5Q96P11 429 aaKnown RBP18.66■□□□□ 0.58
LRCH3-208ENST00000443727 FRG2BQ96QU4 278 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 NTMT1Q9BV86 223 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 ELOVL6Q9H5J4 265 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 DDX31Q9H8H2 851 aaKnown RBP18.66■□□□□ 0.58
LRCH3-208ENST00000443727 PSD3Q9NYI0 1048 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 TFECO14948 347 aaPredicted RBP18.65■□□□□ 0.58
LRCH3-208ENST00000443727 RIPK2O43353 540 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 PROM1O43490 865 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 OR10H2O60403 315 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 PRKRAO75569 313 aaKnown RBP18.65■□□□□ 0.58
LRCH3-208ENST00000443727 ETHE1O95571 254 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 NR2F6P10588 404 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 ESRRAP11474 423 aaPredicted RBP18.65■□□□□ 0.58
LRCH3-208ENST00000443727 TAC1P20366 129 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 BSGP35613 385 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 RFC3P40938 356 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 RNF4P78317 190 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 C10orf62Q5T681 223 aaPredicted RBP18.65■□□□□ 0.58
LRCH3-208ENST00000443727 IL20RBQ6UXL0 311 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 MDGA2Q7Z553 956 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 SIAH3Q8IW03 269 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 GPALPP1Q8IXQ4 340 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 GHDCQ8N2G8 530 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 OR8K3Q8NH51 312 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 PPWD1Q96BP3 646 aaKnown RBP18.65■□□□□ 0.58
LRCH3-208ENST00000443727 AHSPQ9NZD4 102 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 UNC79Q9P2D8 2635 aa18.65■□□□□ 0.58
LRCH3-208ENST00000443727 A0A0A6YYD5 115 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 IQANK1A0A1B0GTG1 560 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ARHGAP10A1A4S6 786 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 GLOD5A6NK44 160 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 TMEM200CA6NKL6 621 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 TMPRSS11DO60235 418 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 OR6B1O95007 311 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 OTCP00480 354 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 GBAP04062 536 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ALOX15P16050 662 aaPredicted RBP18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ABOP16442 354 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 SOX3P41225 446 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 HK2P52789 917 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 GPR85P60893 370 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 IGLV3-21P80748 117 aaPredicted RBP18.64■□□□□ 0.57
LRCH3-208ENST00000443727 TRAF3Q13114 568 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 RNFT1Q5M7Z0 435 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ADGRD1Q6QNK2 874 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 SPPL2CQ8IUH8 684 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 SENP5Q96HI0 755 aaPredicted RBP18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ART5Q96L15 291 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 RASL10BQ96S79 203 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 PELOQ9BRX2 385 aaKnown RBP18.64■□□□□ 0.57
LRCH3-208ENST00000443727 CNPPD1Q9BV87 410 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ZNF717Q9BY31 904 aaPredicted RBP18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ZBTB26Q9HCK0 441 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 ASB4Q9Y574 426 aa18.64■□□□□ 0.57
LRCH3-208ENST00000443727 A0A1W2PR48 441 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 A8MT66 165 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 SEMA3DO95025 777 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 GPR75O95800 540 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 RPS17P08708 135 aaKnown RBP18.63■□□□□ 0.57
LRCH3-208ENST00000443727 FAM153BP0C7A2 387 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 CDH13P55290 713 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 C3AR1Q16581 482 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 FAM153CQ494X1 144 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 ZNF787Q6DD87 383 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 TIFABQ6ZNK6 161 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 RPS27LQ71UM5 84 aaKnown RBP18.63■□□□□ 0.57
LRCH3-208ENST00000443727 PSD4Q8NDX1 1056 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 OR4F6Q8NGB9 312 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 ZNF721Q8TF20 911 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 CCDC120Q96HB5 630 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.63■□□□□ 0.57
LRCH3-208ENST00000443727 TINAGQ9UJW2 476 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 PPT2Q9UMR5 302 aa18.63■□□□□ 0.57
LRCH3-208ENST00000443727 NOTCH2Q04721 2471 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 AIFM1O95831 613 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 TSPAN8P19075 237 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 GCAP28676 217 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 DCTP40126 519 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 HSF1Q00613 529 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 SLC29A2Q14542 456 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 GGTA1PQ4G0N0 100 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 MRM1Q6IN84 353 aaKnown RBP18.62■□□□□ 0.57
LRCH3-208ENST00000443727 OPN5Q6U736 354 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 PAGE2Q7Z2X7 111 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 ST13P4Q8IZP2 240 aaPredicted RBP18.62■□□□□ 0.57
LRCH3-208ENST00000443727 ZNF483Q8TF39 744 aaPredicted RBP18.62■□□□□ 0.57
LRCH3-208ENST00000443727 RIT1Q92963 219 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 FBXL20Q96IG2 436 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 PSMC3IPQ9P2W1 217 aaPredicted RBP18.62■□□□□ 0.57
LRCH3-208ENST00000443727 SNX6Q9UNH7 406 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 SLC12A4Q9UP95 1085 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 CENPEQ02224 2701 aa18.62■□□□□ 0.57
LRCH3-208ENST00000443727 MYO7BQ6PIF6 2116 aa18.61■□□□□ 0.57
LRCH3-208ENST00000443727 CROCCQ5TZA2 2017 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms