RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 TICAM1Q8IUC6 712 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 RIMKLAQ8IXN7 391 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 KRTCAP2Q8N6L1 136 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 OR4K14Q8NGD5 310 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 METTL21AQ8WXB1 218 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 ANKRD9Q96BM1 317 aaPredicted RBP14.83□□□□□ -0.04
USP40-206ENST00000443711 PPCDCQ96CD2 204 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 ZNF764Q96H86 408 aaPredicted RBP14.83□□□□□ -0.04
USP40-206ENST00000443711 ZBTB18Q99592 522 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 DPH1Q9BZG8 443 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 ACTL8Q9H568 366 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 SEMA3GQ9NS98 782 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 TAS2R7Q9NYW3 318 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 UTS2RQ9UKP6 389 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 ARL2BPQ9Y2Y0 163 aa14.83□□□□□ -0.04
USP40-206ENST00000443711 COPG1Q9Y678 874 aaKnown RBP14.83□□□□□ -0.04
USP40-206ENST00000443711 OR2W5A6NFC9 320 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 GABRR3A8MPY1 467 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 PCDH17O14917 1159 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SCAMP2O15127 329 aaKnown RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 FGF17O60258 216 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 CCDC22O60826 627 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 LDB3O75112 727 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 ALOX12BO75342 701 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 ERAL1O75616 437 aaKnown RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 COX7A2P14406 83 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 LIFP15018 202 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 MAOAP21397 527 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 GPX3P22352 226 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 FOXL2P58012 376 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 UFM1P61960 85 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 RPS18P62269 152 aaKnown RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 FOLH1Q04609 750 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SRSF11Q05519 484 aaKnown RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 PDE7AQ13946 482 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SERTAD2Q14140 314 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SQLEQ14534 574 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SSPNQ14714 243 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 NSDHLQ15738 373 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 OR4N5Q8IXE1 308 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SAMD14Q8IZD0 417 aaPredicted RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 GLB1L3Q8NCI6 653 aaPredicted RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 KLHL29Q96CT2 875 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 NAF1Q96HR8 494 aaKnown RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 TMEM121BQ9BXQ6 578 aaPredicted RBP14.82□□□□□ -0.04
USP40-206ENST00000443711 ALOXE3Q9BYJ1 711 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SLC35C2Q9NQQ7 365 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 NECTIN3Q9NQS3 549 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 GIMAP4Q9NUV9 329 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 SH3BP4Q9P0V3 963 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 IL17BQ9UHF5 180 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 ZNF780BQ9Y6R6 833 aa14.82□□□□□ -0.04
USP40-206ENST00000443711 IGKV3D-11A0A0A0MRZ8 115 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 NDUFAB1O14561 156 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 KLK10O43240 276 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 CREG1O75629 220 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 UMODP07911 640 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 C8orf89P0DMQ9 161 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 XKP51811 444 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 IGLV3-21P80748 117 aaPredicted RBP14.81□□□□□ -0.04
USP40-206ENST00000443711 UGT8Q16880 541 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 DPY19L1Q2PZI1 675 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 CPTPQ5TA50 214 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 FAAH2Q6GMR7 532 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 VASH2Q86V25 355 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 CPSF7Q8N684 471 aaKnown RBP14.81□□□□□ -0.04
USP40-206ENST00000443711 NATD1Q8N6N6 113 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 OR7A2PQ8NGA2 310 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 BCAS4Q8TDM0 211 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 EXOSC8Q96B26 276 aaKnown RBP14.81□□□□□ -0.04
USP40-206ENST00000443711 NACC2Q96BF6 587 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 TESCQ96BS2 214 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 COQ8BQ96D53 544 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 ZNF385DQ9H6B1 395 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 TMEM45AQ9NWC5 275 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 C5AR2Q9P296 337 aa14.81□□□□□ -0.04
USP40-206ENST00000443711 C19orf25Q9UFG5 118 aaPredicted RBP14.81□□□□□ -0.04
USP40-206ENST00000443711 ACACAQ13085 2346 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 TCRBV16S1A1N1A0A5B0 115 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 CAPNS1P04632 268 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 CPMP14384 443 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 PORP16435 677 aaPredicted RBP14.8□□□□□ -0.04
USP40-206ENST00000443711 CSNK2A2P19784 350 aaPredicted RBP14.8□□□□□ -0.04
USP40-206ENST00000443711 MMP11P24347 488 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 EFNA3P52797 238 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 ID2Q02363 134 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 PGS1Q32NB8 556 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 FAM69BQ5VUD6 431 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 ANKRD26P1Q6NSI1 321 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 PAOXQ6QHF9 649 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 TMEM205Q6UW68 189 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 CAMKMTQ7Z624 323 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 RAB43Q86YS6 212 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 TMEM151BQ8IW70 566 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 ANKS4BQ8N8V4 417 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 CCDC197Q8NCU1 140 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 TSLPQ969D9 159 aa14.8□□□□□ -0.04
USP40-206ENST00000443711 VPS50Q96JG6 964 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms