RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR10H4Q8NGA5 316 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SLC5A11Q8WWX8 675 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ACOT12Q8WYK0 555 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TCEAL3Q969E4 200 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MARC2Q969Z3 335 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TCEAL4Q96EI5 215 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 DUSP26Q9BV47 211 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CD244Q9BZW8 370 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MS4A7Q9GZW8 240 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 SHARPINQ9H0F6 387 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NLE1Q9NVX2 485 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 RREB1Q92766 1687 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PTPRFP10586 1907 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 DDX60Q8IY21 1712 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 SOX14O95416 240 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NPR2P20594 1047 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MC4RP32245 332 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SOAT1P35610 550 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MEOX2P50222 304 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CBLL1Q75N03 491 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZFP41Q8N8Y5 198 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OR13C4Q8NGS5 318 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SH3RF2Q8TEC5 729 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TMEM138Q9NPI0 162 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 FBXL2Q9UKC9 423 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ASB1Q9Y576 335 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PLCH1Q4KWH8 1693 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SIPA1L3O60292 1781 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 APOC1P02654 83 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NUDT7P0C024 238 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OPCMLQ14982 345 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OR7D4Q8NG98 312 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SCAMP5Q8TAC9 235 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SAP130Q9H0E3 1048 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 FN3KQ9H479 309 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SNX11Q9Y5W9 270 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 KLK8O60259 260 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 FAM189BP81408 668 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 KLHL36Q8N4N3 616 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MEIOBQ8N635 442 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZC3H10Q96K80 434 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 SLC35A5Q9BS91 424 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LYARQ9NX58 379 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 VPS29Q9UBQ0 182 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OR6C74A6NCV1 312 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 POM121CA8CG34 1229 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 GABRR3A8MPY1 467 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PCDH7O60245 1069 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 LGALS2P05162 132 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 S100PP25815 95 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 HK3P52790 923 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PTGES3Q15185 160 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TMEM107Q6UX40 140 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 DNAJB7Q7Z6W7 309 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 BARHL1Q9BZE3 327 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZYG11BQ9C0D3 744 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TRBV4-1A0A0J9YWV2 114 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 AIPO00170 330 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SERPINA3P01011 423 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SRPRAP08240 638 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 PRSS56P0CW18 603 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 IL10RBQ08334 325 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 XKR6Q5GH73 641 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PYHIN1Q6K0P9 492 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PLA2G15Q8NCC3 412 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NFKBIDQ8NI38 313 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TMEM163Q8TC26 289 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ACTL8Q9H568 366 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 HHATLQ9HCP6 504 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CKAP5Q14008 2032 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CHST10O43529 356 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 WISP3O95389 354 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 ANXA4P09525 319 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 IRF8Q02556 426 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZNF630Q2M218 657 aaPredicted RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 TUSC1Q2TAM9 212 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 RAB11FIP2Q7L804 512 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 GPRIN1Q7Z2K8 1008 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 STX12Q86Y82 276 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 TCEANCQ8N8B7 351 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OR56B4Q8NH76 319 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PKMYT1Q99640 499 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ASIC5Q9NY37 505 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 C2orf92A0A1B0GVN3 265 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SGK494L7N484 410 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CLCN4P51793 760 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 PRAMEF18Q5VWM3 479 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SLC9B2Q86UD5 537 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 C7orf57Q8NEG2 295 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 ZC3HAV1LQ96H79 300 aaKnown RBP4.8□□□□□ -1.64
HERC1-201ENST00000443617 ART5Q96L15 291 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 SYT17Q9BSW7 474 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 OR10A4Q9H209 315 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 EXTL2Q9UBQ6 330 aa4.8□□□□□ -1.64
HERC1-201ENST00000443617 NME7Q9Y5B8 376 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms