RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 TCTN3Q6NUS6 607 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 NOXRED1Q6NXP6 359 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 RIPOR1Q6ZS17 1223 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 ZNF781Q8N8C0 355 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 OR2T11Q8NH01 316 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 DNAJB14Q8TBM8 379 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 RAB3IL1Q8TBN0 382 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 M1APQ8TC57 530 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 C16orf78Q8WTQ4 265 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 C11orf24Q96F05 449 aaPredicted RBP11.54□□□□□ -0.56
USP1-203ENST00000442679 METTL2AQ96IZ6 378 aaKnown RBP11.54□□□□□ -0.56
USP1-203ENST00000442679 SORT1Q99523 831 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 CCT7Q99832 543 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 EBPLQ9BY08 206 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 SLC25A18Q9H1K4 315 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 LRTM1Q9HBL6 345 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 ADAP2Q9NPF8 381 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
USP1-203ENST00000442679 THAP1Q9NVV9 213 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 C1orf109Q9NX04 203 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
USP1-203ENST00000442679 SMG1Q96Q15 3661 aaKnown RBP11.54□□□□□ -0.56
USP1-203ENST00000442679 C1orf226A1L170 272 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 SAGE2PA6NJ88 616 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 NPIPB8E9PQR5 432 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 K7EM74 188 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 ALPPP05187 535 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 ITGAMP11215 1152 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 SLC26A5P58743 744 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 IGLV3-21P80748 117 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 ELAVL1Q15717 326 aaKnown RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 GALNTL6Q49A17 601 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 LACTB2Q53H82 288 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 SOWAHCQ53LP3 525 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 VWA5B1Q5TIE3 1220 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 AGAP7PQ5VUJ5 663 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 JMJD6Q6NYC1 403 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 ASB18Q6ZVZ8 466 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 MMP21Q8N119 569 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 TMEM132CQ8N3T6 1108 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 NFAM1Q8NET5 270 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 OR4K14Q8NGD5 310 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 BRIX1Q8TDN6 353 aaKnown RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 ZNF75CPQ92670 426 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 RBM18Q96H35 190 aaKnown RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 DGAT2Q96PD7 388 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 FAIM2Q9BWQ8 316 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 SEMA4CQ9C0C4 833 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 ZNF552Q9H707 407 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 MMP25Q9NPA2 562 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 PNPOQ9NVS9 261 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 PSME2Q9UL46 239 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 TP53TG5Q9Y2B4 290 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 DLGAP4Q9Y2H0 992 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 ZNF451Q9Y4E5 1061 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 POLR3HQ9Y535 204 aaPredicted RBP11.53□□□□□ -0.56
USP1-203ENST00000442679 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 PIEZO2Q9H5I5 2752 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 NUP210LQ5VU65 1888 aa11.53□□□□□ -0.56
USP1-203ENST00000442679 A8MUI8 341 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 PEX11AO75192 247 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 SNNO75324 88 aaPredicted RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 PDGFAP04085 211 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 IL3P08700 152 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 DRD2P14416 443 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 ALOX15P16050 662 aaPredicted RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 NR1D1P20393 614 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 PIK3R1P27986 724 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 GSTM5P46439 218 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 STT3AP46977 705 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 ALDH9A1P49189 494 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 XKP51811 444 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 C2orf80Q0P641 193 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 KIAA0040Q15053 153 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 TERF2Q15554 542 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 RFTN2Q52LD8 501 aaPredicted RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 SLC48A1Q6P1K1 146 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 SIRT6Q8N6T7 355 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 OR14A16Q8NHC5 309 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 CDC26Q8NHZ8 85 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 PTPMT1Q8WUK0 201 aaPredicted RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 PSMF1Q92530 271 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
USP1-203ENST00000442679 C19orf60Q96EN9 201 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 PPP3R2Q96LZ3 170 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 C3orf30Q96M34 536 aa11.52□□□□□ -0.57
USP1-203ENST00000442679 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms