RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 STT3AP46977 705 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 NEK2P51955 445 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 ARFIP1P53367 373 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 HNRNPH2P55795 449 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 FOLH1Q04609 750 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 CUL3Q13618 768 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 C18orf63Q68DL7 685 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 IL20RBQ6UXL0 311 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 SULF2Q8IWU5 870 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 L3MBTL4Q8NA19 623 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 OR52B6Q8NGF0 335 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 TANKQ92844 425 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 ANKRD9Q96BM1 317 aaPredicted RBP18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 MTFMTQ96DP5 389 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 CCDC120Q96HB5 630 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 SERPINI1Q99574 410 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 PELOQ9BRX2 385 aaKnown RBP18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 CNPPD1Q9BV87 410 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 ELOVL6Q9H5J4 265 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 SEMA4BQ9NPR2 832 aaPredicted RBP18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 PCTPQ9UKL6 214 aa18.45■□□□□ 0.54
SHROOM1-204ENST00000440118 OR7A17O14581 309 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 PRKRAO75569 313 aaKnown RBP18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 ABHD2P08910 425 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 SOX3P41225 446 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 HK2P52789 917 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 RNF4P78317 190 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 PLGLB1Q02325 96 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 C3AR1Q16581 482 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 FRG2Q64ET8 278 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 RPTNQ6XPR3 784 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 TRMT10CQ7L0Y3 403 aaKnown RBP18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF227Q86WZ6 799 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF321PQ8N8H1 164 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 PSD4Q8NDX1 1056 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 MTBPQ96DY7 904 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 FRG2BQ96QU4 278 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 RASL10BQ96S79 203 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 ATG4BQ9Y4P1 393 aa18.44■□□□□ 0.54
SHROOM1-204ENST00000440118 EML6Q6ZMW3 1958 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 ACOT7O00154 380 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 FOXE1O00358 373 aaPredicted RBP18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 EEDO75530 441 aaKnown RBP18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 OR6B1O95007 311 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 OTCP00480 354 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 FAM58BPP0C7Q3 252 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 ALOX15P16050 662 aaPredicted RBP18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 TAC1P20366 129 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 HSF1Q00613 529 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 BIKQ13323 160 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 SGO1Q5FBB7 561 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 C10orf62Q5T681 223 aaPredicted RBP18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 C6orf163Q5TEZ5 329 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 MDGA2Q7Z553 956 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 MILR1Q7Z6M3 343 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 MRGPRGQ86SM5 289 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 SPPL2CQ8IUH8 684 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 SIAH3Q8IW03 269 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 OR8K3Q8NH51 312 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 WDR20Q8TBZ3 569 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 NSUN5Q96P11 429 aaKnown RBP18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 AHSPQ9NZD4 102 aa18.43■□□□□ 0.54
SHROOM1-204ENST00000440118 CRYBG3Q68DQ2 2970 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 A0A0A6YYD5 115 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 IQANK1A0A1B0GTG1 560 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 GLOD5A6NK44 160 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 PRRG2O14669 202 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 SEMA3DO95025 777 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 ETHE1O95571 254 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 GBAP04062 536 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 BSGP35613 385 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 SMSP52788 366 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 OR52E8Q6IFG1 317 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 OPN5Q6U736 354 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 RTL4Q6ZR62 310 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 PAGE2Q7Z2X7 111 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 EID3Q8N140 333 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 ZNF808Q8N4W9 903 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 SLC22A8Q8TCC7 542 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 PPWD1Q96BP3 646 aaKnown RBP18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 GAL3ST4Q96RP7 486 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 NTMT1Q9BV86 223 aa18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 DDX31Q9H8H2 851 aaKnown RBP18.42■□□□□ 0.54
SHROOM1-204ENST00000440118 A8MT66 165 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 RIPK2O43353 540 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 PROM1O43490 865 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 TMPRSS11DO60235 418 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 HS6ST1O60243 411 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 WISP2O76076 250 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 AIFM1O95831 613 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 RPS17P08708 135 aaKnown RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 PTGER1P34995 402 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 HERVK_113P63132 956 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 ERVK-8P63133 956 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 IGLV3-21P80748 117 aaPredicted RBP18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 TRAF3Q13114 568 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 RNFT1Q5M7Z0 435 aa18.41■□□□□ 0.54
SHROOM1-204ENST00000440118 SLC29A4Q7RTT9 530 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms