RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PELOQ9BRX2 385 aaKnown RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 FAIM2Q9BWQ8 316 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 KCNK13Q9HB14 408 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 TEX10Q9NXF1 929 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 PTGFRNQ9P2B2 879 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 CLCA3PQ9Y6N3 262 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 C1orf226A1L170 272 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 WDR91A4D1P6 747 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 SUV39H1O43463 412 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 RGS14O43566 566 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 DYRK3O43781 588 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 PCDH7O60245 1069 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 UQCRHP07919 91 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 NEFHP12036 1026 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 COX7A2P14406 83 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 TIA1P31483 386 aaKnown RBP eCLIP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 GALNSP34059 522 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 STT3AP46977 705 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 CLCN2P51788 898 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 TAS2R50P59544 299 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 RAE1P78406 368 aaKnown RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 PLIN5Q00G26 463 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 FOLH1Q04609 750 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 CHI3L2Q15782 390 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 UGT3A2Q3SY77 523 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 SH2D4BQ5SQS7 431 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 ABHD17BQ5VST6 288 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 HHATQ5VTY9 493 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 KIRREL3Q8IZU9 778 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 LGI4Q8N135 537 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 SLC5A8Q8N695 610 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 SIRT6Q8N6T7 355 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 RBMXL3Q8N7X1 1067 aaKnown RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 MORN4Q8NDC4 146 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 DNAJB14Q8TBM8 379 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 TM4SF18Q96CE8 201 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 VMP1Q96GC9 406 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 RBM18Q96H35 190 aaKnown RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 ZNF354BQ96LW1 612 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 DGAT2Q96PD7 388 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 CCT7Q99832 543 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 RNF32Q9H0A6 362 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 ZBTB20Q9HC78 741 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 NKIRAS1Q9NYS0 192 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 PSME2Q9UL46 239 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 WBP11Q9Y2W2 641 aaKnown RBP11.04□□□□□ -0.64
HSPG2-206ENST00000439717 CCL27Q9Y4X3 112 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 PCDHA9Q9Y5H5 950 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 DNAJC15Q9Y5T4 150 aa11.04□□□□□ -0.64
HSPG2-206ENST00000439717 GNG14A0A1W2PPG7 69 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 GLOD5A6NK44 160 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 A8MUI8 341 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PGRMC2O15173 223 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PRKRAO75569 313 aaKnown RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 HSPA4LO95757 839 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 SLC35E2P0CK97 266 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 DRD2P14416 443 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 TNNI3P19429 210 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PIK3R1P27986 724 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ARRB2P32121 409 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 GPR143P51810 404 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ABCE1P61221 599 aaKnown RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ID2Q02363 134 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 BTKQ06187 659 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 HEPACAMQ14CZ8 416 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 MEP1AQ16819 746 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 SLC48A1Q6P1K1 146 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 LINC00696Q6ZRV3 163 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 Q6ZS92 163 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ARMC10Q8N2F6 343 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ANKRD42Q8N9B4 389 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 APCDD1LQ8NCL9 501 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 OR4K14Q8NGD5 310 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PTPMT1Q8WUK0 201 aaPredicted RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 TWIST2Q8WVJ9 160 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 HAS2Q92819 552 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PNPLA2Q96AD5 504 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ATP6V1G3Q96LB4 118 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 SH3GL2Q99962 352 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PAIP2Q9BPZ3 127 aaKnown RBP11.03□□□□□ -0.64
HSPG2-206ENST00000439717 TUBB1Q9H4B7 451 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 PFDN4Q9NQP4 134 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ABI3Q9P2A4 366 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 ZDHHC2Q9UIJ5 367 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 CES1P1Q9UKY3 287 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 B3GNT3Q9Y2A9 372 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 FIS1Q9Y3D6 152 aa11.03□□□□□ -0.64
HSPG2-206ENST00000439717 DYTNA2CJ06 578 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 C17orf105B2RV13 164 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 TMEM233B4DJY2 109 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 OR10H2O60403 315 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SEC22BO75396 215 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms