RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ZNF614Q8N883 585 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TCEANCQ8N8B7 351 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 KIAA0895Q8NCT3 520 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR5AP2Q8NGF4 316 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR6S1Q8NH40 331 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM151AQ8WW52 585 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SGF29Q96ES7 293 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 NEDD4LQ96PU5 975 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 CDCA3Q99618 268 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 LPAR4Q99677 370 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 GPATCH1Q9BRR8 931 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SYT11Q9BT88 431 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 CLEC7AQ9BXN2 247 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRIM15Q9C019 465 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 LSG1Q9H089 658 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 COPS7BQ9H9Q2 264 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 KLHL8Q9P2G9 620 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 MAN1B1Q9UKM7 699 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PPP1R3CQ9UQK1 317 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 EXOGQ9Y2C4 368 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 HBS1LQ9Y450 684 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SMAD5-AS1Q9Y6J3 95 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 FRMPD3Q5JV73 1810 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 GBF1Q92538 1859 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 DMXL1Q9Y485 3027 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 ECM29Q5VYK3 1845 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 PHIPQ8WWQ0 1821 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 AK9Q5TCS8 1911 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 A0A087WUV0 522 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 A0A0J9YWU9 116 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 A0A0U1RQK1 487 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 A0A1W2PR80 420 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF320A2RRD8 509 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 RTCAO00442 366 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 IFIT3O14879 490 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 TEX28O15482 410 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NME6O75414 186 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 FRAT2O75474 233 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SORBS2O94875 1100 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SIX3O95343 332 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 DUS4LO95620 317 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 MOCS2O96007 188 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GP1BBP13224 206 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GOT1P17174 413 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 TYMPP19971 482 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 CASTP20810 708 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 ELAVL4P26378 380 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 TIA1P31483 386 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 CTNNA1P35221 906 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 RFC2P35250 354 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 OPRL1P41146 370 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NPBWR1P48145 328 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 CDH18Q13634 790 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GRB14Q14449 540 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 PTPN14Q15678 1187 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 CDO1Q16878 200 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 IQCCQ4KMZ1 466 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 EPC2Q52LR7 807 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SNRNP48Q6IEG0 339 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 PODNL1Q6PEZ8 512 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 METTL7BQ6UX53 244 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GBP6Q6ZN66 633 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 MCM10Q7L590 875 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 C5orf24Q7Z6I8 188 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 PHLDB2Q86SQ0 1253 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 CREBRFQ8IUR6 639 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM9BQ8IZU0 186 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SYCP3Q8IZU3 236 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR10G8Q8NGN5 311 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NCOA7Q8NI08 942 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GDAP1Q8TB36 358 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 GRK7Q8WTQ7 553 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NXPE2Q96DL1 559 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 RBM4BQ9BQ04 359 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SYT15Q9BQS2 421 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 MCRIP2Q9BUT9 160 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 MMADHCQ9H3L0 296 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 EGLN3Q9H6Z9 239 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SPHK2Q9NRA0 654 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 MIS18AQ9NYP9 233 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 HACD3Q9P035 362 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLC12A6Q9UHW9 1150 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 PRDM4Q9UKN5 801 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 POMT2Q9UKY4 750 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NOL7Q9UMY1 257 aaKnown RBP2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 NCKAP1Q9Y2A7 1128 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 SYNRGQ9UMZ2 1314 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 ARAP2Q8WZ64 1704 aa2.82□□□□□ -1.96
HMGB3P12-201ENST00000438745 DOCK3Q8IZD9 2030 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 BRWD1Q9NSI6 2320 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 CNOT1A5YKK6 2376 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 HELZ2Q9BYK8 2649 aaKnown RBP2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 CHD7Q9P2D1 2997 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 DNAH12Q6ZR08 3092 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 ASPMQ8IZT6 3477 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRAV18A0A075B6X5 111 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 MTMR11A4FU01 709 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 C2CD4DB7Z1M9 353 aa2.81□□□□□ -1.96
HMGB3P12-201ENST00000438745 E9PQ18 207 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms