RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TOX2Q96NM4 488 aa15.93■□□□□ 0.14
TTC3-209ENST00000438055 FERD3LQ96RJ6 166 aa15.93■□□□□ 0.14
TTC3-209ENST00000438055 CDADC1Q9BWV3 514 aa15.93■□□□□ 0.14
TTC3-209ENST00000438055 SGPP1Q9BX95 441 aa15.93■□□□□ 0.14
TTC3-209ENST00000438055 RC3H2Q9HBD1 1191 aaKnown RBP15.93■□□□□ 0.14
TTC3-209ENST00000438055 GPC6Q9Y625 555 aaPredicted RBP15.93■□□□□ 0.14
TTC3-209ENST00000438055 PRRT4C9JH25 899 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 M0R3H8 397 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 CXCR2P25025 360 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 GSTM5P46439 218 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 C21orf58P58505 322 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 C1DQ13901 141 aaKnown RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 DCUN1D3Q8IWE4 304 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 LAS2Q8IYD9 372 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 PLA2G15Q8NCC3 412 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 OR4C15Q8NGM1 316 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 MARCH7Q9H992 704 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 TOR4AQ9NXH8 423 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 SCHIP1Q9P0W5 487 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 DKK3Q9UBP4 350 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 GON4LQ3T8J9 2241 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 DDX6P26196 483 aaKnown RBP eCLIP15.92■□□□□ 0.147e-7■□□□□ 9.2
TTC3-209ENST00000438055 ACVR2AP27037 513 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 RSBN1Q5VWQ0 802 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 ZNF547Q8IVP9 402 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 ZDHHC5Q9C0B5 715 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 PAK6Q9NQU5 681 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 THSD1Q9NS62 852 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 PLCXD1Q9NUJ7 323 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 CLEC2DQ9UHP7 191 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 ARHGAP33O14559 1287 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 C8orf89P0DMQ9 161 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 ACP5P13686 325 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 PSMA1P25786 263 aaKnown RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 PIK3CBP42338 1070 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 LIM2P55344 173 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 TAB1Q15750 504 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 SYPL1Q16563 259 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 GPAT3Q53EU6 434 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 CRB2Q5IJ48 1285 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 ARMC4Q5T2S8 1044 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 AGAP7PQ5VUJ5 663 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 ZNF367Q7RTV3 350 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 TRIM69Q86WT6 500 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 C9orf43Q8TAL5 461 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 ZBED6CLQ96FA7 236 aaPredicted RBP15.92■□□□□ 0.14
TTC3-209ENST00000438055 CFL2Q9Y281 166 aa15.92■□□□□ 0.14
TTC3-209ENST00000438055 PSMD11O00231 422 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 WWP2O00308 870 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PPM1DO15297 605 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 CAPN5O15484 640 aaPredicted RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 MPZL2O60487 215 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 MOSPD3O75425 235 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PDE9AO76083 593 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 DDCP20711 480 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PLAG1Q6DJT9 500 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 DESI1Q6ICB0 168 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 KRT73Q86Y46 540 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 CPA6Q8N4T0 437 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 MRPL43Q8N983 215 aaKnown RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 CAPSLQ8WWF8 208 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 QRFPRQ96P65 431 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 ASPNQ9BXN1 380 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 SLAMF7Q9NQ25 335 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 TEX10Q9NXF1 929 aaPredicted RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 CARNS1A5YM72 827 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 TFECO14948 347 aaPredicted RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 CCR8P51685 355 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PRMT2P55345 433 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PUM1Q14671 1186 aaKnown RBP eCLIP15.91■□□□□ 0.14
TTC3-209ENST00000438055 TYW3Q6IPR3 259 aaKnown RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 CCBE1Q6UXH8 406 aaPredicted RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 SPATC1Q76KD6 591 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 NUDT13Q86X67 352 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 KLHL6Q8WZ60 621 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 OR5P2Q8WZ92 322 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 SMPDL3AQ92484 453 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 ANKHQ9HCJ1 492 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PCDHGB6Q9Y5F9 930 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 DSCR3O14972 297 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PRKRAO75569 313 aaKnown RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 KRT8P05787 483 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 PTNP21246 168 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 LIPKQ5VXJ0 399 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 SFTPA1Q8IWL2 248 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 GOT1L1Q8NHS2 421 aaPredicted RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.91■□□□□ 0.145e-7■□□□□ 9.4
TTC3-209ENST00000438055 MTERF3Q96E29 417 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 SLC35G5Q96KT7 338 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 COQ10AQ96MF6 247 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 TEFMQ96QE5 360 aaKnown RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 TRMT61BQ9BVS5 477 aaKnown RBP15.91■□□□□ 0.14
TTC3-209ENST00000438055 SLC23A2Q9UGH3 650 aa15.91■□□□□ 0.14
TTC3-209ENST00000438055 NCBP2P52298 156 aaKnown RBP eCLIP15.9■□□□□ 0.142e-13■□□□□ 9.2
TTC3-209ENST00000438055 LASP1Q14847 261 aaKnown RBP15.9■□□□□ 0.14
TTC3-209ENST00000438055 SNAPC1Q16533 368 aa15.9■□□□□ 0.14
TTC3-209ENST00000438055 LINC00299Q6ZSB3 139 aa15.9■□□□□ 0.14
TTC3-209ENST00000438055 C12orf66Q96MD2 445 aa15.9■□□□□ 0.14
TTC3-209ENST00000438055 FBXW2Q9UKT8 454 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms