RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TTC23LQ6PF05 361 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 KIAA1324Q6UXG2 1013 aaKnown RBP9.01□□□□□ -0.97
CUX1-206ENST00000437600 SLCO6A1Q86UG4 719 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 P3H2Q8IVL5 708 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 HORMAD2Q8N7B1 307 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 OR52E4Q8NGH9 312 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 OR2L2Q8NH16 312 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 XAGE5Q8WWM1 108 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 FCRL1Q96LA6 429 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 C17orf62Q9BQA9 187 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 QRSL1Q9H0R6 528 aaKnown RBP9.01□□□□□ -0.97
CUX1-206ENST00000437600 KLHL31Q9H511 634 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 RERGLQ9H628 205 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 POLE4Q9NR33 117 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 NDRG4Q9ULP0 352 aaKnown RBP9.01□□□□□ -0.97
CUX1-206ENST00000437600 RNF6Q9Y252 685 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 PRELID1Q9Y255 219 aa9.01□□□□□ -0.97
CUX1-206ENST00000437600 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
CUX1-206ENST00000437600 NPIPB8E9PQR5 432 aa9□□□□□ -0.97
CUX1-206ENST00000437600 TMPRSS11DO60235 418 aa9□□□□□ -0.97
CUX1-206ENST00000437600 UGT2B11O75310 529 aa9□□□□□ -0.97
CUX1-206ENST00000437600 TNFRSF21O75509 655 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ERAL1O75616 437 aaKnown RBP9□□□□□ -0.97
CUX1-206ENST00000437600 GASTP01350 101 aa9□□□□□ -0.97
CUX1-206ENST00000437600 DNTTP04053 509 aa9□□□□□ -0.97
CUX1-206ENST00000437600 STSP08842 583 aa9□□□□□ -0.97
CUX1-206ENST00000437600 RYKP34925 604 aa9□□□□□ -0.97
CUX1-206ENST00000437600 IDUAP35475 653 aa9□□□□□ -0.97
CUX1-206ENST00000437600 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
CUX1-206ENST00000437600 MAPK12P53778 367 aa9□□□□□ -0.97
CUX1-206ENST00000437600 CD300CQ08708 224 aa9□□□□□ -0.97
CUX1-206ENST00000437600 NR1D2Q14995 579 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SMAD2Q15796 467 aaKnown RBP9□□□□□ -0.97
CUX1-206ENST00000437600 ZNF362Q5T0B9 420 aaPredicted RBP9□□□□□ -0.97
CUX1-206ENST00000437600 NUDT18Q6ZVK8 323 aa9□□□□□ -0.97
CUX1-206ENST00000437600 LRRTM4Q86VH4 590 aa9□□□□□ -0.97
CUX1-206ENST00000437600 LGI4Q8N135 537 aa9□□□□□ -0.97
CUX1-206ENST00000437600 LINC01555Q8NAE3 123 aa9□□□□□ -0.97
CUX1-206ENST00000437600 OR10G2Q8NGC3 310 aa9□□□□□ -0.97
CUX1-206ENST00000437600 DNAJB8Q8NHS0 232 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ZNF420Q8TAQ5 688 aaPredicted RBP9□□□□□ -0.97
CUX1-206ENST00000437600 RAD51AP1Q96B01 352 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SGPP1Q9BX95 441 aa9□□□□□ -0.97
CUX1-206ENST00000437600 KLHL25Q9H0H3 589 aa9□□□□□ -0.97
CUX1-206ENST00000437600 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
CUX1-206ENST00000437600 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
CUX1-206ENST00000437600 PCDHGB3Q9Y5G1 929 aa9□□□□□ -0.97
CUX1-206ENST00000437600 LOC100506127A0A0U1RQW1 187 aa9□□□□□ -0.97
CUX1-206ENST00000437600 A0A1W2PQF6 199 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SHISA7A6NL88 538 aa9□□□□□ -0.97
CUX1-206ENST00000437600 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
CUX1-206ENST00000437600 M0R3G1 203 aa9□□□□□ -0.97
CUX1-206ENST00000437600 RNASET2O00584 256 aaKnown RBP9□□□□□ -0.97
CUX1-206ENST00000437600 GPR37L1O60883 481 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SEMA7AO75326 666 aa9□□□□□ -0.97
CUX1-206ENST00000437600 JRKO75564 520 aa9□□□□□ -0.97
CUX1-206ENST00000437600 C9P02748 559 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SEMG1P04279 462 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ADRA2AP08913 450 aa9□□□□□ -0.97
CUX1-206ENST00000437600 NTSR1P30989 418 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ACSL1P33121 698 aa9□□□□□ -0.97
CUX1-206ENST00000437600 LIPAP38571 399 aa9□□□□□ -0.97
CUX1-206ENST00000437600 TMBIM6P55061 237 aa9□□□□□ -0.97
CUX1-206ENST00000437600 PUM1Q14671 1186 aaKnown RBP eCLIP9□□□□□ -0.975e-7■■■□□ 14.6
CUX1-206ENST00000437600 BCL7AQ4VC05 210 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ANXA8L1Q5VT79 327 aa9□□□□□ -0.97
CUX1-206ENST00000437600 FAM71E1Q6IPT2 247 aa9□□□□□ -0.97
CUX1-206ENST00000437600 DHRS4L2Q6PKH6 230 aa9□□□□□ -0.97
CUX1-206ENST00000437600 GPR155Q7Z3F1 870 aa9□□□□□ -0.97
CUX1-206ENST00000437600 C17orf64Q86WR6 236 aa9□□□□□ -0.97
CUX1-206ENST00000437600 RAB2BQ8WUD1 216 aa9□□□□□ -0.97
CUX1-206ENST00000437600 MUL1Q969V5 352 aa9□□□□□ -0.97
CUX1-206ENST00000437600 ARSGQ96EG1 525 aa9□□□□□ -0.97
CUX1-206ENST00000437600 C12orf66Q96MD2 445 aa9□□□□□ -0.97
CUX1-206ENST00000437600 SCN3BQ9NY72 215 aa9□□□□□ -0.97
CUX1-206ENST00000437600 BTNL2Q9UIR0 455 aa9□□□□□ -0.97
CUX1-206ENST00000437600 TDRD6O60522 2096 aaKnown RBP9□□□□□ -0.97
CUX1-206ENST00000437600 TRBC2A0A5B9 178 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 NADKO95544 446 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 C5AR1P21730 350 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 TTKP33981 857 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 EIF2B2P49770 351 aaKnown RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 BCAP31P51572 246 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ADPRHP54922 357 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 GRSF1Q12849 480 aaKnown RBP eCLIP8.99□□□□□ -0.97
CUX1-206ENST00000437600 VEZF1Q14119 521 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 MAPK11Q15759 364 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 CYP2A13Q16696 494 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 GCNT6Q5T4J0 391 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 ZNF776Q68DI1 518 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 SLC9B2Q86UD5 537 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 RPLP0P6Q8NHW5 317 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 SLC38A5Q8WUX1 472 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 COX14Q96I36 57 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 INSM2Q96T92 566 aaPredicted RBP8.99□□□□□ -0.97
CUX1-206ENST00000437600 EFCAB11Q9BUY7 163 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 SLC17A9Q9BYT1 436 aa8.99□□□□□ -0.97
CUX1-206ENST00000437600 SYNPO2LQ9H987 977 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms