RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 GPR18Q14330 331 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 ZNF691Q5VV52 312 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 FAHD1Q6P587 224 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 TMEM64Q6YI46 380 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 VN1R4Q7Z5H5 301 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 ASPGQ86U10 573 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 SYNPO2LQ9H987 977 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 ATG4BQ9Y4P1 393 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 ENTPD2Q9Y5L3 495 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 LRP4O75096 1905 aa24.34■■□□□ 1.49
CPNE1-216ENST00000437340 C5orf58C9J3I9 102 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 VIPP01282 170 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 UGT2B7P16662 529 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 FAM174AQ8TBP5 190 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 UCN3Q969E3 161 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 THAP11Q96EK4 314 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 SHDQ96IW2 340 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 ZNF300Q96RE9 604 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-216ENST00000437340 BBS4Q96RK4 519 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 KLK4Q9Y5K2 254 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 SNX11Q9Y5W9 270 aa24.33■■□□□ 1.49
CPNE1-216ENST00000437340 SNRNP200O75643 2136 aaKnown RBP24.32■■□□□ 1.48
CPNE1-216ENST00000437340 KIR2DS5A0A0G2JLQ3 304 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 A0A0G2JNG1 304 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 SPTY2D1-AS1A0A0U1RR47 76 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 FAM170BA6NMN3 283 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 KIR2DS3K7RE56 304 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 AHCYL1O43865 530 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 B4GALT2O60909 372 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 PDE9AO76083 593 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 TFPTP0C1Z6 253 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 CD6P30203 668 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 RRM2P31350 389 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 SH3BGRP55822 239 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-216ENST00000437340 ESRRGP62508 458 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 RELAQ04206 551 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 KEAP1Q14145 624 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 KIR2DS5Q14953 304 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 SLC38A5Q8WUX1 472 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 ROGDIQ9GZN7 287 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 SEMA3GQ9NS98 782 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 HSPE1-MOB4S4R3N1 261 aa24.32■■□□□ 1.48
CPNE1-216ENST00000437340 BCKDKO14874 412 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 SH3BP5O60239 455 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 AIFM1O95831 613 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 CERS1P27544 350 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ELK4P28324 431 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 GPC1P35052 558 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 NCBP2P52298 156 aaKnown RBP eCLIP24.31■■□□□ 1.489e-8■□□□□ 9.8
CPNE1-216ENST00000437340 RAB8AP61006 207 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ISL1P61371 349 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 EIF2B5Q13144 721 aaKnown RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 TOP3AQ13472 1001 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 LAPTM4AQ15012 233 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 SLC48A1Q6P1K1 146 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 FBXO42Q6P3S6 717 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 TNFAIP8L2Q6P589 184 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ALDH16A1Q8IZ83 802 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 SETD9Q8NE22 299 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 SFXN5Q8TD22 340 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 TM4SF19Q96DZ7 209 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ACTR10Q9NZ32 417 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 KIF17Q9P2E2 1029 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 CPNE7Q9UBL6 633 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 CES1P1Q9UKY3 287 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 RAB23Q9ULC3 237 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 LYVE1Q9Y5Y7 322 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 CEPT1Q9Y6K0 416 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 HMGN4O00479 90 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 MITFO75030 526 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 DNAJB5O75953 348 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 SLC35G6P0C7Q6 338 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 RPS26P62854 115 aaKnown RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 UBE2IP63279 158 aaKnown RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 C6orf141Q5SZD1 244 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 BHLHB9Q6PI77 547 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ATG16L2Q8NAA4 619 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 CHDHQ8NE62 594 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-216ENST00000437340 FBLIM1Q8WUP2 373 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 MOAP1Q96BY2 351 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 GPR174Q9BXC1 333 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 FBXW2Q9UKT8 454 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 BLOC1S6Q9UL45 172 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 ENTPD4Q9Y227 616 aa24.31■■□□□ 1.48
CPNE1-216ENST00000437340 OR6C74A6NCV1 312 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 TMEM247A6NEH6 219 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 TNFRSF11BO00300 401 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 PGRMC2O15173 223 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 PROM1O43490 865 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 THEGLP0DJG4 465 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 MAGP20916 626 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 TP53BP2Q13625 1128 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 CEBPEQ15744 281 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 ZNF773Q6PK81 442 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 TMEM19Q96HH6 336 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 SLC35G5Q96KT7 338 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 OR2A5Q96R48 311 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 TBC1D17Q9HA65 648 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 KRT84Q9NSB2 600 aa24.3■■□□□ 1.48
CPNE1-216ENST00000437340 A0A1W2PPC4 97 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms