RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FAM205BPQ63HN1 556 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM214Q6NUQ4 689 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 UEVLDQ8IX04 471 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ASB12Q8WXK4 309 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 LMF2Q9BU23 707 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 POTEKPQ9BYX7 375 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 TRNAU1APQ9NX07 287 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 H3BSH0 61 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 RBBP9O75884 186 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 FAM155BO75949 473 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 CD46P15529 392 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 DGKQP52824 942 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 FGL1Q08830 312 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SERINC3Q13530 473 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 STK11Q15831 433 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 LRRC25Q8N386 305 aaPredicted RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF781Q8N8C0 355 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 PAK4O96013 591 aaPredicted RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 RHOP08100 348 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 GTF2F2P13984 249 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 DRD1P21728 446 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 POU3F4P49335 361 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ADGRE1Q14246 886 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 EIF4HQ15056 248 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 FBXL22Q6P050 247 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 UNC5DQ6UXZ4 953 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF578Q96N58 590 aaPredicted RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 GNG13Q9P2W3 67 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 LMTK2Q8IWU2 1503 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SEMA4FO95754 770 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 HSD17B12Q53GQ0 312 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 MANEAQ5SRI9 462 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SYNPOQ8N3V7 929 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 OR13C4Q8NGS5 318 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 SMOC2Q9H3U7 446 aa10.76□□□□□ -0.69
SCN4A-201ENST00000435607 NSUN3Q9H649 340 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 WDR6Q9NNW5 1121 aaKnown RBP10.76□□□□□ -0.69
SCN4A-201ENST00000435607 A8MXE2 369 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TLX2O43763 284 aaPredicted RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CNTN5O94779 1100 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LCN1P31025 176 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TAS2R39P59534 338 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ROR2Q01974 943 aaKnown RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 MAB21L1Q13394 359 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LIPJQ5W064 366 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LPCAT4Q643R3 524 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LRRC55Q6ZSA7 311 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 RXFP3Q9NSD7 469 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PCDHGA8Q9Y5G5 932 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR5H15A6NDH6 313 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR5H14A6NHG9 310 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR5H1A6NKK0 313 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ABLIM1O14639 778 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 HLA-DQB2P05538 268 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ID2Q02363 134 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR4F3Q6IEY1 312 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC18B1Q6NT16 456 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 FAM180BQ6P0A1 224 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LILRB2Q8N423 598 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 NUP43Q8NFH3 380 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PYURFQ96I23 114 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 MYRFLQ96LU7 910 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC6A7Q99884 636 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ZBTB26Q9HCK0 441 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ATRNL1Q5VV63 1379 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 A0A1W2PPW3 197 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 A6NL46 340 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CD72P21854 359 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TSFMP43897 325 aaKnown RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SERTAD2Q14140 314 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PTPRCAPQ14761 206 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 VWA5B1Q5TIE3 1220 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 MAMDC2Q7Z304 686 aaPredicted RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TSEN2Q8NCE0 465 aaKnown RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR2T33Q8NG76 320 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LRTOMTQ8WZ04 291 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LOC102725191A0A1B0GVB3 256 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 A0A1W2PPH5 198 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 EMC8O43402 210 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TBX18O95935 607 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PLATP00750 562 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF460Q14592 562 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PTGR1Q14914 329 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC10A6Q3KNW5 377 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PIGGQ5H8A4 983 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TICAM1Q8IUC6 712 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR11L1Q8NGX0 322 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 FAM3CQ92520 227 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CPT1BQ92523 772 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 COG8Q96MW5 612 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms