RNA–Protein interactions for RNA: ENST00000434684.1

PPARGC1B-205, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best)

Gene PPARGC1B, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-205ENST00000434684 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 MAPK8P45983 427 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SPINT3P49223 89 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 NTHL1P78549 312 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 EEF1A2Q05639 463 aaKnown RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 HYAL2Q12891 473 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 RPS26P11Q5JNZ5 115 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 TMPRSS11BQ86T26 416 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 TRIM48Q8IWZ4 208 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 PEX5LQ8IYB4 626 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 LAS2Q8IYD9 372 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 TCEAL4Q96EI5 215 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 MAGEB10Q96LZ2 347 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 POLR2J2Q9GZM3 115 aaKnown RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 IGFLR1Q9H665 355 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SLC25A19Q9HC21 320 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SNX11Q9Y5W9 270 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 LRRTM2O43300 516 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SGTAO43765 313 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SLC16A8O95907 504 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 TGFB1P01137 390 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 SSTR4P31391 388 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 HMGA2P52926 109 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 LIM2P55344 173 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 CD83Q01151 205 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 RHAGQ02094 409 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 RUNX1T1Q06455 604 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 ZNF438Q7Z4V0 828 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 VN1R5Q7Z5H4 357 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 MMP21Q8N119 569 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 CELF5Q8N6W0 485 aaKnown RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 VN1R2Q8NFZ6 395 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 C19orf43Q9BQ61 176 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 WRAP53Q9BUR4 548 aaKnown RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 C11orf54Q9H0W9 315 aaPredicted RBP12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 AP1M2Q9Y6Q5 423 aa12.78□□□□□ -0.36
PPARGC1B-205ENST00000434684 H3BN98 237 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 MPZL2O60487 215 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 CSNK1DP48730 415 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 PTPN5P54829 565 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 RPS26P62854 115 aaKnown RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 HOXC5Q00444 222 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 FCHO2Q0JRZ9 810 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 C2orf80Q0P641 193 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 PUM1Q14671 1186 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 LARS2Q15031 903 aaKnown RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SEC23BQ15437 767 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 UAP1L1Q3KQV9 507 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SPIN4Q56A73 249 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 ZNF770Q6IQ21 691 aaPredicted RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 NEIL2Q969S2 332 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 TMEM80Q96HE8 168 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 RNF170Q96K19 258 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 BHLHE41Q9C0J9 482 aaPredicted RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 MIXL1Q9H2W2 232 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 OR51B5Q9H339 312 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 BRF2Q9HAW0 419 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 A8MVJ9 347 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 IFNW1P05000 195 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 GSTM1P09488 218 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 RHCEP18577 417 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 MEF2AQ02078 507 aaPredicted RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SCN1BQ07699 218 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 RBBP4Q09028 425 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 LRRC74AQ0VAA2 488 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 CCDC58Q4VC31 144 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 CRB2Q5IJ48 1285 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 TRIM40Q6P9F5 258 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 COMMD6Q7Z4G1 85 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 ASZ1Q8WWH4 475 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 KLHL6Q8WZ60 621 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SLC7A6Q92536 515 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SLC6A18Q96N87 628 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 ATP6V1HQ9UI12 483 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 STUB1Q9UNE7 303 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 SH2B3Q9UQQ2 575 aa12.77□□□□□ -0.37
PPARGC1B-205ENST00000434684 A0A0B4J293 547 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 KPNA5O15131 536 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 AP2A2O94973 939 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 CSF3P09919 207 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 HSD3B1P14060 373 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 HSD3B2P26439 372 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 IMPA1P29218 277 aa12.76□□□□□ -0.37
PPARGC1B-205ENST00000434684 OPRD1P41143 372 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms