RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RBMXL3Q8N7X1 1067 aaKnown RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR1N1Q8NGS0 311 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 THAP3Q8WTV1 239 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 CCDC126Q96EE4 140 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 C19orf60Q96EN9 201 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 APOPT1Q96IL0 206 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 LMF1Q96S06 567 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 SERPINI1Q99574 410 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDR77Q9BQA1 342 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 MECRQ9BV79 373 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 GATA5Q9BWX5 397 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 ILKAPQ9H0C8 392 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 EPN3Q9H201 632 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 RPF2Q9H7B2 306 aaKnown RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLAMF7Q9NQ25 335 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 RRAGDQ9NQL2 400 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 RIC8BQ9NVN3 520 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 OXSMQ9NWU1 459 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 AHSPQ9NZD4 102 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 C5AR2Q9P296 337 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 TRPS1Q9UHF7 1281 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 LGALS13Q9UHV8 139 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 ANAPC2Q9UJX6 822 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLLPQ9Y342 182 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 TSC22D4Q9Y3Q8 395 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 ATG4BQ9Y4P1 393 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 ASB4Q9Y574 426 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 SPACA6W5XKT8 324 aa5.4□□□□□ -1.54
HMGB3P24-201ENST00000433260 IGKV3D-11A0A0A0MRZ8 115 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 A0A1W2PR48 441 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 C17orf105B2RV13 164 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 EIF1AYO14602 144 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PCDH17O14917 1159 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PGRMC2O15173 223 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 FGF17O60258 216 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PRKNO60260 465 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 KLHL41O60662 606 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ESRRBO95718 433 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 MLYCDO95822 493 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 WDPCPO95876 746 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 KRT6AP02538 564 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 KRT6BP04259 564 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 TUBBP07437 444 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 EDN3P14138 238 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 TPP2P29144 1249 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 TLX1P31314 330 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 CASRP41180 1078 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 KRT6CP48668 564 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ALDH9A1P49189 494 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 HTR6P50406 440 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PKNOX1P55347 436 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 DNAJB13P59910 316 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 HMGCS1Q01581 520 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 LCP2Q13094 533 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 MFAP5Q13361 173 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 RCN2Q14257 317 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 GGTA1PQ4G0N0 100 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PRR30Q53SZ7 412 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 CRB2Q5IJ48 1285 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 SPDYAQ5MJ70 313 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 LIPMQ5VYY2 423 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 CLEC6AQ6EIG7 209 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 SPINK14Q6IE38 97 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 FAM180BQ6P0A1 224 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 IGFL3Q6UXB1 125 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 C16orf47Q6ZP98 133 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 DGAT2L6Q6ZPD8 337 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZCCHC23Q6ZST2 131 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 RPS19BP1Q86WX3 136 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 CRLF3Q8IUI8 442 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 BEST3Q8N1M1 668 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 METTL4Q8N3J2 472 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZCCHC7Q8N3Z6 543 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 RIBC1Q8N443 379 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 C1orf52Q8N6N3 182 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF321PQ8N8H1 164 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 NFAM1Q8NET5 270 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 RDH11Q8TC12 318 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 M1APQ8TC57 530 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 AGR3Q8TD06 166 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 AGAP11Q8TF27 550 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 TM9SF4Q92544 642 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 NCLNQ969V3 563 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ANKRD9Q96BM1 317 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 APIPQ96GX9 242 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 RBM18Q96H35 190 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF354BQ96LW1 612 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF382Q96SR6 550 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 PAIP2Q9BPZ3 127 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 EBPLQ9BY08 206 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF717Q9BY31 904 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 DEFB126Q9BYW3 111 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 EPS8L2Q9H6S3 715 aa5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 DDX31Q9H8H2 851 aaKnown RBP5.39□□□□□ -1.55
HMGB3P24-201ENST00000433260 WDR41Q9HAD4 459 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms