RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CCDC197Q8NCU1 140 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 C17orf47Q8NEP4 570 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 OR1B1Q8NGR6 318 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 RDH11Q8TC12 318 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 FBXO25Q8TCJ0 367 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 LIPHQ8WWY8 451 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 PRCCQ92733 491 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 RPGRIP1Q96KN7 1286 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 RAB40CQ96S21 281 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 PKP2Q99959 881 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 DDX50Q9BQ39 737 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 ZNF559Q9BR84 538 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 RPP25Q9BUL9 199 aaKnown RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 CACNG6Q9BXT2 260 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SLC39A8Q9C0K1 460 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 NACA2Q9H009 215 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ATG10Q9H0Y0 220 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 HEXA-AS1Q9H8Q6 139 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 ELL3Q9HB65 397 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 RPS10P5Q9NQ39 176 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 DEPPQ9NTK1 212 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 AKAP7Q9P0M2 348 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 ERVK-18Q9QC07 812 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 KLK13Q9UKR3 277 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 SPATA2Q9UM82 520 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 EXOC6BQ9Y2D4 811 aa1.76□□□□□ -2.13
CDC40-204ENST00000431461 KLF2Q9Y5W3 355 aaPredicted RBP1.76□□□□□ -2.13
CDC40-204ENST00000431461 NEDD4P46934 1319 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 TRGV8A0A0C4DH27 118 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 IGLON5A6NGN9 336 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 MEI4A8MW99 385 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 EPM2AB3EWF7 344 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 CFLARO15519 480 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ECE2O60344 883 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 NME2P1O60361 137 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SNAP91O60641 907 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SORBS2O94875 1100 aaKnown RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 OR6A2O95222 327 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 NUDT14O95848 222 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 EPOP01588 193 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 FCER2P06734 321 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ODC1P11926 461 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 HSD17B1P14061 328 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 AREGP15514 252 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 GLRA1P23415 457 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SLC1A4P43007 532 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 KCNJ1P48048 391 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 NT5C2P49902 561 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 TNFSF10P50591 281 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 BACE1P56817 501 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 EVCP57679 992 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ACY1Q03154 408 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 GIT2Q14161 759 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 HEPACAMQ14CZ8 416 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SGCBQ16585 318 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 RTL6Q6ICC9 239 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 CAPN13Q6MZZ7 669 aaPredicted RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 ABRAXAS1Q6UWZ7 409 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 BAIAP2L2Q6UXY1 529 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ZNF730Q6ZMV8 503 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ZNF841Q6ZN19 808 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 NUFIP2Q7Z417 695 aaKnown RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 ASPGQ86U10 573 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 RANBP3LQ86VV4 465 aaPredicted RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 ERICH1Q86X53 443 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 CACUL1Q86Y37 369 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 MARCH9Q86YJ5 346 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 LMNTD2Q8IXW0 634 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 PEX5LQ8IYB4 626 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 TDHQ8IZJ6 230 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 BATF2Q8N1L9 274 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SLC39A11Q8N1S5 342 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 FBXW8Q8N3Y1 598 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SAMD12Q8N8I0 201 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 C4orf32Q8N8J7 132 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 RTL3Q8N8U3 475 aaKnown RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 AQP11Q8NBQ7 271 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 TRPV3Q8NET8 790 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 MIPOL1Q8TD10 442 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 FAM222BQ8WU58 562 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SMPDL3AQ92484 453 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 GLYATL1Q969I3 302 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 PNPLA2Q96AD5 504 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 SLCO4A1Q96BD0 722 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 CNRIP1Q96F85 164 aaPredicted RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 C16orf58Q96GQ5 468 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 PDLIM5Q96HC4 596 aaKnown RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 CDHR1Q96JP9 859 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 C18orf12Q96KH6 178 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 ZNF597Q96LX8 424 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 FAM218AQ96MZ4 157 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 RUNDC3BQ96NL0 473 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 VGLL1Q99990 258 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 FTHL17Q9BXU8 183 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 LRRCC1Q9C099 1032 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 WWP1Q9H0M0 922 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 DDX47Q9H0S4 455 aaKnown RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 RPAP3Q9H6T3 665 aaPredicted RBP1.75□□□□□ -2.13
CDC40-204ENST00000431461 ZNF665Q9H7R5 613 aa1.75□□□□□ -2.13
CDC40-204ENST00000431461 WDR41Q9HAD4 459 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms