RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ANKRD26P1Q6NSI1 321 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 OAFQ86UD1 273 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF888P0CJ79 500 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-207ENST00000429896 NCK1P16333 377 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 PSMD7P51665 324 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CLCN7P51798 805 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 OLR1P78380 273 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 MXD1Q05195 221 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF33BQ06732 778 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 RBM44Q6ZP01 1051 aaKnown RBP12.33□□□□□ -0.44
PTCH1-207ENST00000429896 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-207ENST00000429896 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 MYDGFQ969H8 173 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TBX5Q99593 518 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 XKRYO14609 159 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 IFNW1P05000 195 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 MPLP40238 635 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 OR1D5P58170 312 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 BNC1Q01954 994 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 OR4K17Q8NGC6 315 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 C1GALT1C1Q96EU7 318 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 TBC1D24Q9ULP9 559 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 FZD6O60353 706 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 ENGP17813 658 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 PSMB5P28074 263 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 NSDHLQ15738 373 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 GALNT18Q6P9A2 607 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 IKBIPQ70UQ0 350 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 ZHX1-C8orf76Q96EF9 292 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 ALG14Q96F25 216 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 PIGUQ9H490 435 aa12.33□□□□□ -0.44
PTCH1-207ENST00000429896 RTCAO00442 366 aaKnown RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 DGKQP52824 942 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GPLD1P80108 840 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GPR68Q15743 365 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 C6orf136Q5SQH8 315 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 UBE2Q1Q7Z7E8 422 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 IQCHQ86VS3 1027 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 FAM81AQ8TBF8 368 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 WDR60Q8WVS4 1066 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 HTRA1Q92743 480 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ECHDC3Q96DC8 303 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 NECAB3Q96P71 396 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 PLGRKTQ9HBL7 147 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 HMG20AQ9NP66 347 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 TRIP12Q14669 1992 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 DHRS12A0PJE2 317 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 TSPAN11A1L157 253 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 TP53I11O14683 189 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 YY2O15391 372 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 FCER2P06734 321 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 S100GP29377 79 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 SPEM2Q0P670 501 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 HLA-BQ31612 363 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ULBP3Q9BZM4 244 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GIMAP2Q9UG22 337 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 SSR3Q9UNL2 185 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 A0A087WXM4 84 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 HCN1O60741 890 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 PTNP21246 168 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 MATN1P21941 496 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 MTPNP58546 118 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 CEACAM20Q6UY09 585 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GALNT12Q8IXK2 581 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 CCDC116Q8IYX3 515 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 MINDY1Q8N5J2 469 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 OR5L2Q8NGL0 311 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ASB12Q8WXK4 309 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 GAL3ST3Q96A11 431 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 PDP1Q9P0J1 537 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 FABP3P05413 133 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF846Q147U1 533 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 NLRP8Q86W28 1048 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 MSLNLQ96KJ4 702 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 KIR3DX1Q9H7L2 352 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 PRSS51A0A1B0GVH4 220 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 PORP16435 677 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 ABRAXAS1Q6UWZ7 409 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 OR5P2Q8WZ92 322 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 CD180Q99467 661 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 RNF121Q9H920 327 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 SERINC1Q9NRX5 453 aa12.32□□□□□ -0.44
PTCH1-207ENST00000429896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTCH1-207ENST00000429896 CLIC1O00299 241 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 CTSKP43235 329 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 HSD11B2P80365 405 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 ZP2Q05996 745 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 METRNLQ641Q3 311 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 Q96MT0 163 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 MEAF6Q9HAF1 191 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 PTPRFP10586 1907 aa12.31□□□□□ -0.44
PTCH1-207ENST00000429896 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-207ENST00000429896 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms