RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 TGFB1P01137 390 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 GASTP01350 101 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 ADH1AP07327 375 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 ANXA8P13928 327 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 JUPP14923 745 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 PXNP49023 591 aaPredicted RBP16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 RORCP51449 518 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 RPS13P62277 151 aaKnown RBP16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 SCN1BQ07699 218 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 ACSM2AQ08AH3 577 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 WDR45BQ5MNZ6 344 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 LIPKQ5VXJ0 399 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 ACSM2BQ68CK6 577 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 NLGN4YQ8NFZ3 816 aaPredicted RBP16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR5AK3PQ8NH89 298 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 TMEM159Q96B96 161 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 SPNS1Q9H2V7 528 aa16.07■□□□□ 0.16
PCDH8P1-201ENST00000428983 CDRT1O95170 752 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 SOX14O95416 240 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 CHMP24386 653 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 MAPK1P28482 360 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 IMPA1P29218 277 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 AQP11Q8NBQ7 271 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 VN1R2Q8NFZ6 395 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 HUS1BQ8NHY5 278 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 MED30Q96HR3 178 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR51B5Q9H339 312 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 SNX7Q9UNH6 387 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF106Q9H2Y7 1883 aaKnown RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 LOC105371267A0A1B0GV96 52 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 OTOL1A6NHN0 477 aaPredicted RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 FAM25AB3EWG3 89 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 FAM25CB3EWG5 89 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 FAM25GB3EWG6 89 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 PLA2G10O15496 165 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 TMCC2O75069 709 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF780AO75290 641 aaPredicted RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 ELFN1P0C7U0 828 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 VIPR1P32241 457 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 RAE1P78406 368 aaKnown RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 SRSF11Q05519 484 aaKnown RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 DUSP7Q16829 419 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 TMIGD1Q6UXZ0 262 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 CCDC149Q6ZUS6 474 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 PARS2Q7L3T8 475 aaKnown RBP16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 NXPE3Q969Y0 559 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 DIRAS2Q96HU8 199 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 FRMD6Q96NE9 622 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 VPS35Q96QK1 796 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 SLC22A4Q9H015 551 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR2AG1Q9H205 316 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF556Q9HAH1 456 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 CMAHPQ9Y471 501 aa16.06■□□□□ 0.16
PCDH8P1-201ENST00000428983 A0A1W2PQL4 384 aaPredicted RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 C1orf226A1L170 272 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 HBQ1P09105 142 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 ANXA4P09525 319 aaPredicted RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 IFNA8P32881 189 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 CAV3P56539 151 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 CDC42P60953 191 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 POLR2LP62875 67 aaKnown RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 LARS2Q15031 903 aaKnown RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 UAP1L1Q3KQV9 507 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 ZNF385BQ569K4 471 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 HENMT1Q5T8I9 393 aaKnown RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 TRAPPC5Q8IUR0 188 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 CPA6Q8N4T0 437 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR4M1Q8NGD0 313 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 GRPEL2Q8TAA5 225 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 WDR20Q8TBZ3 569 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 CIDECQ96AQ7 238 aaPredicted RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 RIPOR3Q96MK2 946 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 ACER3Q9NUN7 267 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 MALT1Q9UDY8 824 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 YARS2Q9Y2Z4 477 aaKnown RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 PRAMEF33A0A0G2JMD5 474 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 FABP12A6NFH5 140 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 PRAMEF10O60809 474 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 SCG5P05408 212 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 GPC1P35052 558 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR3A3P47888 321 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 SLC6A11P48066 632 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 FAPQ12884 760 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 GLYR1Q49A26 553 aaPredicted RBP16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 SAXO2Q658L1 398 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR7G3Q8NG95 312 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 NFKBIDQ8NI38 313 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 RASSF5Q8WWW0 418 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 MAP6Q96JE9 813 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 RNF121Q9H920 327 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 CLCA3PQ9Y6N3 262 aa16.05■□□□□ 0.16
PCDH8P1-201ENST00000428983 KNL1Q8NG31 2342 aa16.04■□□□□ 0.16
PCDH8P1-201ENST00000428983 AP2A2O94973 939 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms